DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Prosalpha3T and PAF1

DIOPT Version :9

Sequence 1:	NP_651843.1	Gene:	Prosalpha3T / 43679	FlyBaseID:	FBgn0261395	Length:	251	Species:	Drosophila melanogaster
Sequence 2:	NP_199093.1	Gene:	PAF1 / 834290	AraportID:	AT5G42790	Length:	278	Species:	Arabidopsis thaliana

Alignment Length:	237	Identity:	83/237 - (35%)
Similarity:	123/237 - (51%)	Gaps:	10/237 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 FDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSVDKLM-DTSIPVPRISWLN 68
            :|:..|.:||.|||:||||||||..|....:||.:::.|:||   .|:|.. :.|....:|..::
plant     6 YDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLA---CVNKAQSELSSHQRKIFKVD 67

  Fly    69 ENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSF 133
            ::|.....|.||||.||...:|..:..:.|.:...:|..:||.:|.|..|..||...|||:||..
plant    68 DHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGL 132

  Fly   134 LYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIKV 198
            |..|.| ..|..||.:.|||||..::|..||.:|.||...|::...|.|  ..|.|:....||..
plant   133 LVGGLD-ESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFG--DSSREDLIKDAILA 194

  Fly   199 MGMTLGRDSLTPEKLEIAFVQRYGNTTVFHILEKNEIHRLIE 240
            :..||..::|   |..:..|...|....||.|::..|.::|:
plant   195 VRETLQGETL---KSSLCTVAILGVDEPFHFLDQEAIQKVID 233

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Prosalpha3T	NP_651843.1	PTZ00246	1..241	CDD:173491	83/237 (35%)
Prosalpha3T	NP_651843.1	Ntn_hydrolase	3..218	CDD:294319	76/213 (36%)
PAF1	NP_199093.1	proteasome_alpha_type_1	6..215	CDD:239718	77/217 (35%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0638
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1222564at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820