DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and PBD1

DIOPT Version :9

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_188902.1 Gene:PBD1 / 821834 AraportID:AT3G22630 Length:204 Species:Arabidopsis thaliana


Alignment Length:222 Identity:51/222 - (22%)
Similarity:72/222 - (32%) Gaps:69/222 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YAMEAASQSGTCVGLLAKNGVLLATERSVDKLMDTSIPVPRISWLNENIACCATGNTADGNVLVN 87
            :|:.||..|.....||.||        :.||:|          .|:.:....|:|...|......
plant    12 FAIVAADTSAVHSILLHKN--------NEDKIM----------VLDSHKLVAASGEPGDRVQFTE 58

  Fly    88 QLRMIAQQYQFNFGEMIPCE----------QLVTNLCDIKQAYTQYGGKRPFGVSFLYMGWDCRF 142
            .::.....|:|..|  ||..          :|.|.|           .|.|:.|:.|..|:|...
plant    59 YVQKNVSLYKFRNG--IPLTTAAAANFTRGELATAL-----------RKNPYSVNILMAGYDDES 110

  Fly   143 GFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKG-YVS-----------PSVEEAKDVA 195
            |..||..|    |.            |.:..:.|..|..| |.|           .|||||.::.
plant   111 GASLYYID----YI------------ATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELV 159

  Fly   196 IKVMGMTLGRDSLTPEKLEIAFVQRYG 222
            .|.:.....|..:.|....|..|.:.|
plant   160 DKCILEIRSRLVVAPPNFVIKIVDKDG 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 51/222 (23%)
Ntn_hydrolase 3..218 CDD:294319 49/216 (23%)
PBD1NP_188902.1 proteasome_beta_type_2 1..192 CDD:239727 51/222 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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