DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and psma2a

DIOPT Version :9

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001019612.1 Gene:psma2a / 554153 ZFINID:ZDB-GENE-050522-479 Length:234 Species:Danio rerio


Alignment Length:223 Identity:80/223 - (35%)
Similarity:116/223 - (52%) Gaps:12/223 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RFFDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSVDKLMDTSIPVPRISWL 67
            |.:....|.|||.|:|.|:|||:.|.:.....||:.|.|||:||||:....::.....|.::..:
Zfish     4 RGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKVEPI 68

  Fly    68 NENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVS 132
            .::|....:|...|..|||.:.|.:||||...:.|.||..|||..:..:.|.|||.||.||||||
Zfish    69 TKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVS 133

  Fly   133 FLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIK 197
            .|..|||....: |:||||||.|..||||.:|:........|:|. :::..   .:|:|...|| 
Zfish   134 LLIAGWDEDRPY-LFQSDPSGAYFAWKATAMGKNYVNGKTFLEKR-YNEDL---ELEDAIHTAI- 192

  Fly   198 VMGMTLGRD---SLTPEKLEIAFVQRYG 222
               :||...   .:|.:.:|:......|
Zfish   193 ---LTLKESFEGQMTEDNIEVGICNEAG 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 80/223 (36%)
Ntn_hydrolase 3..218 CDD:294319 79/217 (36%)
psma2aNP_001019612.1 PRK03996 5..233 CDD:235192 79/222 (36%)
proteasome_alpha_type_2 6..231 CDD:239719 79/221 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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