DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and psma3

DIOPT Version :9

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001011257.1 Gene:psma3 / 496707 XenbaseID:XB-GENE-976787 Length:255 Species:Xenopus tropicalis


Alignment Length:226 Identity:70/226 - (30%)
Similarity:109/226 - (48%) Gaps:18/226 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSV-DKLMDTSIPVPRISWLN 68
            :|...:.|||:||::|||||.:|...|.|.:|:..|:||:...|:.| .||.:.. ...||..::
 Frog     8 YDLSASTFSPDGRVFQVEYAAKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEG-SNKRIFNVD 71

  Fly    69 ENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSF 133
            .::.....|..||...|.:..|..|..::.|:|..||.:.|...:.....|||.|...||||.||
 Frog    72 RHVGMAVAGLLADARSLADIAREEASNFRANYGYDIPLKHLSDRVAMYVHAYTLYSAVRPFGCSF 136

  Fly   134 LYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAA---MEMLQ-KELFSKGYVSPSV------ 188
            :...::...|.|||..||||...|:....||:...||   :|.|| |::..:..|....      
 Frog   137 MLGSYNEDDGAQLYMVDPSGISYGYWGCAIGKAKQAAKTEIEKLQMKDMTCRDVVKEVAKIIYIV 201

  Fly   189 -EEAKDVAIK-----VMGMTLGRDSLTPEKL 213
             :|.||.:.:     |..:|.|:..:.|:.:
 Frog   202 HDEVKDKSFELELSWVGKITNGKHEIVPKDI 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 70/226 (31%)
Ntn_hydrolase 3..218 CDD:294319 70/226 (31%)
psma3NP_001011257.1 proteasome_alpha_type_3 5..217 CDD:239720 66/209 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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