DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and psma1

DIOPT Version :9

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001008159.1 Gene:psma1 / 493521 XenbaseID:XB-GENE-995831 Length:261 Species:Xenopus tropicalis


Alignment Length:238 Identity:70/238 - (29%)
Similarity:123/238 - (51%) Gaps:11/238 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKN-GVLLATERSVDKLMDTSIPVPRISWLN 68
            :|:..|::||:||::|:||||||..|....|||.:|: .||:|.:|:..:|   :....:|..::
 Frog     6 YDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKSQAVLVALKRAQSEL---AAHQKKILNVD 67

  Fly    69 ENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSF 133
            .::.....|.|||..:|.|.:|......:|.|...:|..:||:.:....|..||..|:||:||..
 Frog    68 NHVGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSQIGSKTQIPTQRYGRRPYGVGL 132

  Fly   134 LYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIKV 198
            |..|:| ..|..::|:.||.||...:|..||.:|.:|...|::.:  ..::..::.:.....::.
 Frog   133 LIAGYD-DMGPHIFQTSPSANYFDCRAMSIGARSQSARTYLERHM--SEFLDCNLNDLVKHGLRA 194

  Fly   199 MGMTL-GRDSLTPEKLEIAFVQRYGNTTVFHILEKNEIHRLIE 240
            :..|| ....||.:.:.|..|   |....|.|.:.:|:...:|
 Frog   195 LRETLPAEQDLTTKNVSIGIV---GKEMEFTIYDDDEVAPFLE 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 70/238 (29%)
Ntn_hydrolase 3..218 CDD:294319 64/214 (30%)
psma1NP_001008159.1 proteasome_alpha_type_1 6..216 CDD:239718 65/218 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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