DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and psma4

DIOPT Version :9

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001007998.1 Gene:psma4 / 493360 XenbaseID:XB-GENE-5837209 Length:261 Species:Xenopus tropicalis


Alignment Length:250 Identity:135/250 - (54%)
Similarity:181/250 - (72%) Gaps:4/250 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARFFDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATE-RSVDKLMDTSIPVPRI 64
            |:|.:||||||||||||||||||||||...:|||:|:||.:|||||.| |::.||:|......:|
 Frog     1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKI 65

  Fly    65 SWLNENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPF 129
            ..||:::||...|.|:|.|||.|:||:|||:|...:.|.||||||||.||||||||||:||||||
 Frog    66 YKLNDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPF 130

  Fly   130 GVSFLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDV 194
            |||.||:|||..:|||||||||||||.||||||||..|.||:.||::: :.:|  ..:::.|..:
 Frog   131 GVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQD-YKEG--DMTLKSALAL 192

  Fly   195 AIKVMGMTLGRDSLTPEKLEIAFVQRYGNTTVFHILEKNEIHRLIERNNNLKRRV 249
            |:||:..|:....|:.||:|||.:.|....|...:|::.|:..||:.:...:.::
 Frog   193 AVKVLNKTMDVSKLSAEKVEIATLTRENGKTKIRVLKQKEVEELIKLHEEEEAKI 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 135/240 (56%)
Ntn_hydrolase 3..218 CDD:294319 128/215 (60%)
psma4NP_001007998.1 proteasome_alpha_type_4 3..216 CDD:239721 128/215 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54118
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 1 1.000 - - FOG0003645
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2516
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

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