DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and psma1

DIOPT Version :9

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001003427.1 Gene:psma1 / 445033 ZFINID:ZDB-GENE-040801-15 Length:262 Species:Danio rerio


Alignment Length:240 Identity:72/240 - (30%)
Similarity:123/240 - (51%) Gaps:15/240 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLA-KNGVLLATERSVDKLMDTSIPVPRISWLN 68
            :|:..|::||:||::|:||||||..|....|||.: .:.||:|.:|:..:|   :....:|..::
Zfish     6 YDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSHSHAVLVALKRAQSEL---AAHQKKILHVD 67

  Fly    69 ENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSF 133
            .:|.....|.|||..:|.|.:|......:|.|...:|..:||:.:....|..||..|:||:||..
Zfish    68 NHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGL 132

  Fly   134 LYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQK--ELFSKGYVSPSVEEAKDVAI 196
            |..|:| ..|..::|:.||.||...||..||.:|.:|...|::  |.|:...::..|:.    .:
Zfish   133 LIAGYD-DMGPHIFQTCPSANYFDCKAMSIGARSQSARTYLERHMEAFNDCNLNALVQH----GL 192

  Fly   197 KVMGMTL-GRDSLTPEKLEIAFVQRYGNTTVFHILEKNEIHRLIE 240
            :.:..|| ....||.:.:.|..|   |....|.|.:.:::...::
Zfish   193 RALRETLPAEQDLTTKNVSIGIV---GKDMEFTIYDDDDVATFLQ 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 72/240 (30%)
Ntn_hydrolase 3..218 CDD:294319 68/216 (31%)
psma1NP_001003427.1 PRK03996 1..238 CDD:235192 72/240 (30%)
proteasome_alpha_type_1 6..216 CDD:239718 69/220 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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