DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and psma1

DIOPT Version :10

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001003427.1 Gene:psma1 / 445033 ZFINID:ZDB-GENE-040801-15 Length:262 Species:Danio rerio


Alignment Length:240 Identity:72/240 - (30%)
Similarity:123/240 - (51%) Gaps:15/240 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLA-KNGVLLATERSVDKLMDTSIPVPRISWLN 68
            :|:..|::||:||::|:||||||..|....|||.: .:.||:|.:|:..:|   :....:|..::
Zfish     6 YDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSHSHAVLVALKRAQSEL---AAHQKKILHVD 67

  Fly    69 ENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSF 133
            .:|.....|.|||..:|.|.:|......:|.|...:|..:||:.:....|..||..|:||:||..
Zfish    68 NHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGL 132

  Fly   134 LYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQK--ELFSKGYVSPSVEEAKDVAI 196
            |..|:| ..|..::|:.||.||...||..||.:|.:|...|::  |.|:...::..|:.    .:
Zfish   133 LIAGYD-DMGPHIFQTCPSANYFDCKAMSIGARSQSARTYLERHMEAFNDCNLNALVQH----GL 192

  Fly   197 KVMGMTL-GRDSLTPEKLEIAFVQRYGNTTVFHILEKNEIHRLIE 240
            :.:..|| ....||.:.:.|..|   |....|.|.:.:::...::
Zfish   193 RALRETLPAEQDLTTKNVSIGIV---GKDMEFTIYDDDDVATFLQ 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 Ntn_hydrolase 3..218 CDD:469781 68/216 (31%)
psma1NP_001003427.1 proteasome_alpha_type_1 6..216 CDD:239718 69/220 (31%)

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