DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and psma2b

DIOPT Version :10

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001122146.1 Gene:psma2b / 403015 ZFINID:ZDB-GENE-060503-941 Length:234 Species:Danio rerio


Alignment Length:236 Identity:83/236 - (35%)
Similarity:120/236 - (50%) Gaps:16/236 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RFFDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSVDKLMDTSIPVPRISWL 67
            |.:....|.|||.|:|.|:|||:.|.:.....||:.|.|||:||||:....::.....|.::..:
Zfish     4 RGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKVEPI 68

  Fly    68 NENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVS 132
            .::|....:|...|..|||.:.|.:||||...:.|.||..|||..:..:.|.|||.||.||||||
Zfish    69 TKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVS 133

  Fly   133 FLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIK 197
            .|..|||....: |:||||||.|..||||.:|:........|:|. :::..   .:|:|...|| 
Zfish   134 LLIAGWDEDRPY-LFQSDPSGAYFAWKATAMGKNYVNGKTFLEKR-YNEDL---ELEDAIHTAI- 192

  Fly   198 VMGMTLGRD---SLTPEKLEIAFVQRYGNTTVFHILEKNEI 235
               :||...   .:|.:.:|:......|    |..|...|:
Zfish   193 ---LTLKESFEGQMTEDNIEVGICNEAG----FRRLSPAEV 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 Ntn_hydrolase 3..218 CDD:469781 79/217 (36%)
psma2bNP_001122146.1 proteasome_alpha_type_2 6..231 CDD:239719 82/234 (35%)

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