DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha3T and psma6

DIOPT Version :9

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_989113.1 Gene:psma6 / 394718 XenbaseID:XB-GENE-943786 Length:246 Species:Xenopus tropicalis


Alignment Length:248 Identity:91/248 - (36%)
Similarity:131/248 - (52%) Gaps:20/248 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDSRTTIFSPEGRLYQVEYAMEAASQSG-TCVGLLAKNGVLLATERSV-DKLMDTSIPVPRISWL 67
            ||...|||||||||||||||.:|.:|.| |.|.:..|:..::.|:|.| |||:|:: .|..:..:
 Frog     9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQRKVPDKLLDSN-TVTHLFRI 72

  Fly    68 NENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVS 132
            .|:|.|..||.|||....|.:.|..|..:::.:|..||.:.|...:.||.|.|||....||.|..
 Frog    73 TESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCC 137

  Fly   133 FLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIK 197
            .:.:|.|...|.|:::.||:|.|.|:|||..|.|...|...|:|::..|  :..:.|:..:.||.
 Frog   138 MILIGVDEENGPQVFKCDPAGYYCGFKATTAGVKQTEATSFLEKKVKKK--LDWTYEQTLETAIS 200

  Fly   198 VMGMTLGRDSLTPEKLEIAFVQRYGNTTV----FHILEKNEIH----RLIERN 242
            .:...|..| ..|.:||:      |..||    |.:|.:.||.    .|.||:
 Frog   201 CLSTVLSID-FKPSELEV------GVVTVEDPKFRVLTEAEIDVHLVALAERD 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 89/245 (36%)
Ntn_hydrolase 3..218 CDD:294319 81/214 (38%)
psma6NP_989113.1 proteasome_alpha_type_6 8..220 CDD:239723 82/220 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.