DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha3T and Psma2

DIOPT Version :10

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_058975.1 Gene:Psma2 / 29669 RGDID:61842 Length:234 Species:Rattus norvegicus


Alignment Length:236 Identity:82/236 - (34%)
Similarity:121/236 - (51%) Gaps:16/236 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RFFDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSVDKLMDTSIPVPRISWL 67
            |.:....|.|||.|:|.|:|||:.|.:.....||:.|.|||:||||:....::.....|.::..:
  Rat     4 RGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPI 68

  Fly    68 NENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVS 132
            .::|....:|...|..|||::.|.:||||...:.|.||..|||..:..:.|.|||.||.||||||
  Rat    69 TKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVS 133

  Fly   133 FLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIK 197
            .|..||:....: |:||||||.|..||||.:|:........|:|. :::..   .:|:|...|| 
  Rat   134 LLICGWNEGRPY-LFQSDPSGAYFAWKATAMGKNYVNGKTFLEKR-YNEDL---ELEDAIHTAI- 192

  Fly   198 VMGMTLGRD---SLTPEKLEIAFVQRYGNTTVFHILEKNEI 235
               :||...   .:|.:.:|:......|    |..|...|:
  Rat   193 ---LTLKESFEGQMTEDNIEVGICNEAG----FRRLTPTEV 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 Ntn_hydrolase 3..218 CDD:469781 78/217 (36%)
Psma2NP_058975.1 proteasome_alpha_type_2 6..231 CDD:239719 81/234 (35%)

Return to query results.
Submit another query.