DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and Psma2

DIOPT Version :9

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_058975.1 Gene:Psma2 / 29669 RGDID:61842 Length:234 Species:Rattus norvegicus


Alignment Length:236 Identity:82/236 - (34%)
Similarity:121/236 - (51%) Gaps:16/236 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RFFDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSVDKLMDTSIPVPRISWL 67
            |.:....|.|||.|:|.|:|||:.|.:.....||:.|.|||:||||:....::.....|.::..:
  Rat     4 RGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPI 68

  Fly    68 NENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVS 132
            .::|....:|...|..|||::.|.:||||...:.|.||..|||..:..:.|.|||.||.||||||
  Rat    69 TKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVS 133

  Fly   133 FLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIK 197
            .|..||:....: |:||||||.|..||||.:|:........|:|. :::..   .:|:|...|| 
  Rat   134 LLICGWNEGRPY-LFQSDPSGAYFAWKATAMGKNYVNGKTFLEKR-YNEDL---ELEDAIHTAI- 192

  Fly   198 VMGMTLGRD---SLTPEKLEIAFVQRYGNTTVFHILEKNEI 235
               :||...   .:|.:.:|:......|    |..|...|:
  Rat   193 ---LTLKESFEGQMTEDNIEVGICNEAG----FRRLTPTEV 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 82/236 (35%)
Ntn_hydrolase 3..218 CDD:294319 78/217 (36%)
Psma2NP_058975.1 proteasome_alpha_type_2 6..231 CDD:239719 81/234 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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