DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and Psma3

DIOPT Version :9

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_035314.3 Gene:Psma3 / 19167 MGIID:104883 Length:255 Species:Mus musculus


Alignment Length:226 Identity:74/226 - (32%)
Similarity:109/226 - (48%) Gaps:18/226 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSV-DKLMDTSIPVPRISWLN 68
            :|...:.|||:||::||||||:|...|.|.:|:..|:||:...|:.| .||.:.. ...|:..::
Mouse     8 YDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEG-SNKRLFNVD 71

  Fly    69 ENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSF 133
            .::.....|..||...|.:..|..|..::.|||..||.:.|...:.....|||.|...||||.||
Mouse    72 RHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSF 136

  Fly   134 LYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAA---MEMLQ-KELFSKGYVSPSV------ 188
            :...:....|.|||..||||...|:....||:...||   :|.|| ||:..:..|....      
Mouse   137 MLGSYSANDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKIIYIV 201

  Fly   189 -EEAKDVAIK-----VMGMTLGRDSLTPEKL 213
             :|.||.|.:     |..:|.||..:.|:.:
Mouse   202 HDEVKDKAFELELSWVGELTKGRHEIVPKDI 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 74/226 (33%)
Ntn_hydrolase 3..218 CDD:294319 74/226 (33%)
Psma3NP_035314.3 proteasome_alpha_type_3 5..217 CDD:239720 69/209 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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