DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and pas-1

DIOPT Version :9

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_506571.1 Gene:pas-1 / 179941 WormBaseID:WBGene00003922 Length:246 Species:Caenorhabditis elegans


Alignment Length:249 Identity:78/249 - (31%)
Similarity:132/249 - (53%) Gaps:17/249 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDSRTTIFSPEGRLYQVEYAMEAASQSG-TCVGLLAKNGVLLATERSV-DKLM--DTSIPVPRIS 65
            ||...||||||||:||||||.:|.:.:. |.|.:...:..::|.::.| |.|:  ||...|.:||
 Worm     9 FDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQIS 73

  Fly    66 WLNENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFG 130
               :::.|||.|...|....:.:.:..|..:::..|..:|||.|...:.|:.|.|||....|..|
 Worm    74 ---QSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLG 135

  Fly   131 VSFLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVA 195
            .:.|::.:|...|.::|:.||:|.|.|.|...:|.|...|...|:|::..|..::.:  ||.::|
 Worm   136 CALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTST--EAIELA 198

  Fly   196 IKVMGMTLGRDSLTPEKLEIAFVQRYGNTTVFHILEKNEI-HRLIERNNNLKRR 248
            |:.:..:||.| :..:.||:..|.:  :.:.|..|..::: |.|    |.:..|
 Worm   199 IEALQTSLGID-VRSKDLEVVVVTK--DNSKFTKLTSDQVEHHL----NQIANR 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 76/240 (32%)
Ntn_hydrolase 3..218 CDD:294319 71/216 (33%)
pas-1NP_506571.1 PRE1 7..245 CDD:223711 77/247 (31%)
proteasome_alpha_type_6 8..220 CDD:239723 71/216 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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