DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and pas-6

DIOPT Version :9

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_504472.1 Gene:pas-6 / 178943 WormBaseID:WBGene00003927 Length:260 Species:Caenorhabditis elegans


Alignment Length:235 Identity:67/235 - (28%)
Similarity:122/235 - (51%) Gaps:15/235 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAK-NGVLLATERSVDKLMDTSIPVPRISWLN 68
            :|...|::||:|||:|||||:||..|....||:.:: :.|::|.:|:.:   |.|....::..::
 Worm     6 YDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQN---DLSSHQKKVYEID 67

  Fly    69 ENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSF 133
            .:......|..:||.:|...|:.....:::::.:.:|.::|..::....||.|||.|:|||||..
 Worm    68 THAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRRPFGVGI 132

  Fly   134 LYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKEL--FSKGYVSPSVEEAKDVAI 196
            |..|:| :.|..:.|:|||........|.||.:|.:|...|::.:  |.|.    :.|:....|:
 Worm   133 LIAGYD-KDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEKS----TPEQLIVHAL 192

  Fly   197 KVMGMTL-GRDSLTPEKLEIAFVQRYGNTTVFHILEKNEI 235
            ..:..|| ..::|..:...|..|   |..:.|.:||..::
 Worm   193 LALRDTLPAEENLNAQNTSIGIV---GKDSPFSLLEDAQV 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 67/235 (29%)
Ntn_hydrolase 3..218 CDD:294319 62/216 (29%)
pas-6NP_504472.1 PRE1 4..237 CDD:223711 67/235 (29%)
proteasome_alpha_type_1 6..216 CDD:239718 63/220 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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