DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and pbs-3

DIOPT Version :9

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_494913.1 Gene:pbs-3 / 173858 WormBaseID:WBGene00003949 Length:204 Species:Caenorhabditis elegans


Alignment Length:112 Identity:22/112 - (19%)
Similarity:40/112 - (35%) Gaps:24/112 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GTCVGLLAKNGVLLATERSVDKLMDT-SIPVPRISWLNENIACCATGNTADGNVLVNQL------ 89
            ||.|.:.....|.:|::..:.:.|.| :....::..:.:.:.....|..:|...::.::      
 Worm     9 GTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFRKNL 73

  Fly    90 ------RMIAQQ----------YQFNFGEMIPCEQLVTNLCDIKQAY 120
                  |.|..|          ||..||... .|.||..|.|..:.|
 Worm    74 YELRENRNIKPQVLSEMISNLAYQHRFGSYF-TEPLVAGLDDTNKPY 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 22/112 (20%)
Ntn_hydrolase 3..218 CDD:294319 22/112 (20%)
pbs-3NP_494913.1 PRE1 3..193 CDD:223711 22/112 (20%)
proteasome_beta_type_3 6..200 CDD:239728 22/112 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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