DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and pas-4

DIOPT Version :9

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_492360.1 Gene:pas-4 / 172679 WormBaseID:WBGene00003925 Length:253 Species:Caenorhabditis elegans


Alignment Length:240 Identity:68/240 - (28%)
Similarity:125/240 - (52%) Gaps:13/240 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATE-RSVDKLMDTSIPVPRISWLN 68
            :|...|||||:|.|:|||||.||..:..|.||:..|:.:::..| :|:..|.|.. .:.:|..::
 Worm     4 YDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDR-TIRKIHMID 67

  Fly    69 ENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSF 133
            :::.....|.:||..|||::.|:..|.|:....:.:....:...:.:.||.:||..|:||||:|.
 Worm    68 DHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISM 132

  Fly   134 LYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIKV 198
            |..|:|.....:|::::|||.|..:.|...||......|.|:::...:.    :|:||..:.:.|
 Worm   133 LIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEEN----TVDEATTLKLVV 193

  Fly   199 MGMTLGRDSLTP---EKLEIAFVQRYGNTTVFHILEKNEIHRLIE 240
            ..:.    .:.|   :.:|||.:::..:.....:|...||..|::
 Worm   194 KSLA----QVVPPGSQNIEIAVMKKVNDELQQRVLSTEEIEALLK 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 68/240 (28%)
Ntn_hydrolase 3..218 CDD:294319 64/216 (30%)
pas-4NP_492360.1 PRK03996 4..234 CDD:235192 68/238 (29%)
proteasome_alpha_type_7 4..212 CDD:239724 64/216 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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