DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and pas-3

DIOPT Version :9

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001379751.1 Gene:pas-3 / 172139 WormBaseID:WBGene00003924 Length:250 Species:Caenorhabditis elegans


Alignment Length:248 Identity:133/248 - (53%)
Similarity:175/248 - (70%) Gaps:7/248 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARFFDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATER-SVDKLMDTSIPVPRI 64
            |||.:||||||||||||||||||||||.|.:|||:|:|:..|:::|.|| :|.||:|.|:...::
 Worm     1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKV 65

  Fly    65 SWLNENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPF 129
            ..|::||:|...|.|||.|:|:|.||..|..|:.::||.:|.||||.|||:.||.|||.||||||
 Worm    66 YRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPF 130

  Fly   130 GVSFLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDV 194
            |||.||:|||..:|:|||||||||||:||||||||....||:.:|::|     |.||::||||.:
 Worm   131 GVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQE-----YKSPNLEEAKQL 190

  Fly   195 AIKVMGMTLGRDSLTPEKLEIAFVQRYGNTTVFHILEKNEIHRLIERNNNLKR 247
            ||||:..||. ..|..||:|:|.:.|....||...|...|:..||..:...::
 Worm   191 AIKVLWKTLD-VKLASEKVEMAVLTRRDGKTVLEELTTKEVDALIAEHEKKEK 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 133/240 (55%)
Ntn_hydrolase 3..218 CDD:294319 124/215 (58%)
pas-3NP_001379751.1 proteasome_alpha_type_4 3..213 CDD:239721 124/215 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166113
Domainoid 1 1.000 237 1.000 Domainoid score I1297
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S260
OMA 1 1.010 - - QHG54118
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 1 1.000 - - FOG0003645
OrthoInspector 1 1.000 - - otm14587
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2516
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.810

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