DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and psma6a

DIOPT Version :9

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_705941.2 Gene:psma6a / 171585 ZFINID:ZDB-GENE-020326-1 Length:246 Species:Danio rerio


Alignment Length:247 Identity:94/247 - (38%)
Similarity:132/247 - (53%) Gaps:18/247 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDSRTTIFSPEGRLYQVEYAMEAASQSG-TCVGLLAKNGVLLATERSV-DKLMDTSIPVPRISWL 67
            ||...|||||||||||||||.:|.:|.| |.|.:..|:..::.|:|.| |||:|:| .|..:..:
Zfish     9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVITQRKVPDKLLDSS-TVTHLFRI 72

  Fly    68 NENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVS 132
            .|||.|..:|.|||....|.:.|..|..:::.:|..||.:.|...:.||.|.|||....||.|..
Zfish    73 TENIGCVMSGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCC 137

  Fly   133 FLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIK 197
            .:.:|.|...|.|:|:.||:|.|.|:|||..|.|...|...|:|::..|  :..:.::..:.||.
Zfish   138 MIVVGVDEELGPQVYKCDPAGYYCGFKATAAGVKQTEATSFLEKKIKKK--LDWTFDQTVETAIS 200

  Fly   198 VMGMTLGRDSLTPEKLEIAFVQRYGNTT---VFHILEKNEIH----RLIERN 242
            .:...|..| ..|.:|||..|     ||   .|.||.::||.    .|.||:
Zfish   201 CLSTVLAID-FKPSELEIGVV-----TTEEPKFRILSESEIDTHLMALTERD 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 92/244 (38%)
Ntn_hydrolase 3..218 CDD:294319 83/214 (39%)
psma6aNP_705941.2 PRK03996 6..239 CDD:235192 91/238 (38%)
proteasome_alpha_type_6 8..220 CDD:239723 83/214 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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