DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mayo and Adgrf4

DIOPT Version :10

Sequence 1:NP_651842.3 Gene:Mayo / 43678 FlyBaseID:FBgn0039818 Length:802 Species:Drosophila melanogaster
Sequence 2:NP_001386280.1 Gene:Adgrf4 / 501106 RGDID:1565216 Length:698 Species:Rattus norvegicus


Alignment Length:667 Identity:133/667 - (19%)
Similarity:237/667 - (35%) Gaps:194/667 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 DLVSVC------KEIMSCDSKVLRLSAQLNATN-----SLLSQFESYMDALPEQLVPKDRCGKVV 264
            ::|..|      |.|.:|.|  |.:.|....|:     ||.|          ..:.|.:..|...
  Rat    71 EIVFTCNQNKWQKTIETCTS--LSVEALFQRTHPATGLSLAS----------SSVFPMNLIGNTA 123

  Fly   265 AKPTSDEAETATTGVETYNFSD-------IGVQALITGNISV---FFANPECDRIT-GLAIFSAP 318
            .....:.:|    |:..|...|       :...|:.:|||:.   ...|...|..| |:      
  Rat   124 PVHIGNVSE----GIRKYCPEDYFCIVDVVKSSAVTSGNIAFVVELLKNISSDLQTYGM------ 178

  Fly   319 GDQRKTSASGFWYRFIRFSEDLAKVKEESNLETAAFLP-----ENLWRQVKSRGATYLIFKVYAH 378
                  .||..|.:...:.:....:...:.:...||:|     .:|...|.|     ...|:..|
  Rat   179 ------HASVTWKKMKNYGKMANHILGPTAISNWAFIPNKNASSDLLDSVNS-----FAKKLQIH 232

  Fly   379 -------DALFVET------------------------------------SLQRTRKPRSKVISI 400
                   |.||::|                                    :||......|:.|::
  Rat   233 GKSESVVDELFIQTKGSRISHGTSGNSLSLSVPRYNATEDVLVLIEIPRQALQELSSNTSQAIAV 297

  Fly   401 SIPGL------------------RSNYLSLPLPFLLRNENLRNPD--SKAFSIGSGCGYWNYE-- 443
            :.|.|                  ....|||.||..| ||.:...|  :|:.|..|.|..|:.|  
  Rat   298 AFPTLGAILKEVHQPNSSLQKPINDLILSLVLPEGL-NEIILTFDKINKSQSTSSQCVSWDAEER 361

  Fly   444 TWSTEGVSTESSSDLLKD--AIIECHTNH---LTQFAFLVGGSYRANDLGEEILITPINEKVLDI 503
            .|.      ||...::.|  :.::|...|   :..|:.|:...             |:.:.:|:.
  Rat   362 QWD------ESPCTVMSDINSTVKCRCRHNKAVMSFSILMSSK-------------PVKDMILNR 407

  Fly   504 ISIVGCSLSLLGILGIFLTAALFKSWRSQASTKV--LLHLCLAMCLQMMLFVFLNTDDVSEALVV 566
            |:.:|.|:|:..::...:..|:.  |.....|::  :.|:|:     :.:.|.|.|.:|  ..::
  Rat   408 ITFIGLSVSIFSLVLCLVIEAIV--WSRVVVTEISYMRHVCI-----VNIAVSLLTANV--WFII 463

  Fly   567 NGNTVR--------CVALGAAMQYSILVLFSWMLIIAFLQFQRYVTVIGIERPPRYILKAAIVA- 622
            ..|...        |||:.....:..|.||.|||      |:..:.|.||....|.::|:.::| 
  Rat   464 GSNFSANAQEDHKWCVAVTFFCHFFFLSLFFWML------FKALLIVYGILVVFRRMMKSRMMAI 522

  Fly   623 -----WLLPLV-PTLLVALIDP-DSYVPSAAQLSTDTGICYP--SGYGLIFGVVLPVTLITVCNL 678
                 :..||| ..:.|::.:| :.|        |....|:.  :....:|...:|...|...||
  Rat   523 GFAIGYGCPLVIAVITVSVTEPGEGY--------TRRDACWLNWNQTKALFAFAIPALAIVAVNL 579

  Fly   679 VIFVYVFYSISHSLSQSIHKNEKKMVVKQIRLSIMLFFLLGLTWIFGIFAFMQ-AGVAFSYLFCI 742
            ::.:.|..:....|..|....:..:|.:..:...:|..||||||.||:...:: ..:.|..:|.:
  Rat   580 LVVLTVAINTQRPLIGSSKSQDMAIVFRISKNVAILTPLLGLTWGFGLTTLLEGTHLVFHIIFAL 644

  Fly   743 TATMQGFVMFIYFVLLD 759
            ....||..:.::..::|
  Rat   645 LNAFQGLFILLFGTIMD 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MayoNP_651842.3 7tmB2_Adhesion 498..766 CDD:320168 62/283 (22%)
TM helix 1 500..525 CDD:320168 5/24 (21%)
TM helix 2 535..557 CDD:320168 5/23 (22%)
TM helix 3 574..600 CDD:320168 8/25 (32%)
TM helix 4 615..635 CDD:320168 6/26 (23%)
TM helix 5 659..688 CDD:320168 6/28 (21%)
TM helix 6 704..730 CDD:320168 10/25 (40%)
TM helix 7 734..759 CDD:320168 4/24 (17%)
Adgrf4NP_001386280.1 GPS 352..394 CDD:460350 10/47 (21%)
7tmB2_GPR111_115 402..669 CDD:320660 62/283 (22%)
TM helix 1 404..429 CDD:320660 5/24 (21%)
TM helix 2 444..466 CDD:320660 6/28 (21%)
TM helix 3 479..506 CDD:320660 10/32 (31%)
TM helix 4 520..540 CDD:320660 4/19 (21%)
TM helix 5 560..589 CDD:320660 6/28 (21%)
TM helix 6 605..631 CDD:320660 10/25 (40%)
TM helix 7 636..661 CDD:320660 4/24 (17%)

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