DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11318 and Adgrl3

DIOPT Version :9

Sequence 1:NP_651842.3 Gene:CG11318 / 43678 FlyBaseID:FBgn0039818 Length:802 Species:Drosophila melanogaster
Sequence 2:XP_011247763.1 Gene:Adgrl3 / 319387 MGIID:2441950 Length:1586 Species:Mus musculus


Alignment Length:690 Identity:146/690 - (21%)
Similarity:257/690 - (37%) Gaps:200/690 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 REHTISGDLNSLHDDVLEGRRRTNDTQGRREMTGIMRNMFRQRGGNLLPADVHMTGQMFGALMQQ 202
            |.|..:||:             |...:...::.|::....|    ||.|.......:....|.::
Mouse   648 RNHLNAGDI-------------TYSVRAMDQLVGLLDVQLR----NLTPGGKDSAARSLNKLQKR 695

  Fly   203 DKDATVSVD-LVSVCKEIMSCDS----KVLRLSAQLNATNSLLSQFESYMDALPEQLVPKDRCGK 262
            ::.....|. :|.....::...:    :.|..|.||.|...||...|.....|.:.|:..|    
Mouse   696 ERSCRAYVQAMVETVNNLLQPQALNAWRDLTTSDQLRAATMLLDTVEESAFVLADNLLKTD---- 756

  Fly   263 VVAKPTSDEAETATTGVETYNFSDIGVQALITGNISVFFANPECDRITGLAIFSAPGDQRKTSAS 327
             :.:..:|                         ||.:                            
Mouse   757 -IVRENTD-------------------------NIQL---------------------------- 767

  Fly   328 GFWYRFIRFSEDLAKVKEESNLETAAFLPENL------------WRQVKSRGATYLIFKVYAHDA 380
                       ::|::..|.|||...| |||:            .:|....|...:.|.:|.:..
Mouse   768 -----------EVARLSTEGNLEDLKF-PENMGHGSTIQLSANTLKQNGRNGEIRVAFVLYNNLG 820

  Fly   381 LFVET------------SLQRTRKPRSKVISISIPGLRSN--YLSLPLPFLLRN-----ENLRNP 426
            .::.|            |...:....|.||:.:|....||  ||:.|:.|.:::     ||. ||
Mouse   821 PYLSTENASMKLGTEAMSTNHSVIVNSPVITAAINKEFSNKVYLADPVVFTVKHIKQSEENF-NP 884

  Fly   427 DSKAFSIGSGCGYWNYET------WSTEG---VSTESSSDLLKDAIIECHTNHLTQFAFLVGG-S 481
            :         |.:|:|..      |||:|   ::|..:.       ..|..||||.||.|:.. .
Mouse   885 N---------CSFWSYSKRTMTGYWSTQGCRLLTTNKTH-------TTCSCNHLTNFAVLMAHVE 933

  Fly   482 YRANDLGEEILITPINEKVLDIISIVGCSLSLLGILGIFLTAALFKSWRSQASTKVLLHLCLAMC 546
            .:.:|        .:::.:||:|:.||..|||:.:|....|...|:..:|..:| :..:||:::.
Mouse   934 VKHSD--------AVHDLLLDVITWVGILLSLVCLLICIFTFCFFRGLQSDRNT-IHKNLCISLF 989

  Fly   547 LQMMLFVF-LNTDDVSEALVVNGNTVRCVALGAAMQYSILVLFSWMLIIAFLQ-FQRYVTVIGI- 608
            :..:||:. :|..|         ..:.|....|.:.:..|..|:||    ||: .|.|:.::.: 
Mouse   990 VAELLFLIGINRTD---------QPIACAVFAALLHFFFLAAFTWM----FLEGVQLYIMLVEVF 1041

  Fly   609 --ERPPR-YILKAAIVAWLLPLVPTLLVALIDPDSY-VPSAAQLSTDTGICYPSGYGLIFGVVLP 669
              |...| |..   :|.:.:|.:...:.|.:|..|| ......|..||       | .|:..:.|
Mouse  1042 ESEHSRRKYFY---LVGYGMPALIVAVSAAVDYRSYGTDKVCWLRLDT-------Y-FIWSFIGP 1095

  Fly   670 VTLITVCNLVIFVYVFYSISHSLS---------QSIHKNEKKMVVKQ-IRLSIMLFFLLGLTWIF 724
            .|||.:.|::......|.:.|..:         .:|:..:.:..:|. :..:|.|..||||||.|
Mouse  1096 ATLIIMLNVIFLGIALYKMFHHTAILKPESGCLDNINYEDNRPFIKSWVIGAIALLCLLGLTWAF 1160

  Fly   725 GIFAFMQAGVAFSYLFCITATMQGFVMFIYFVLLDSTNRR 764
            |:....::.|..:|||.|..::||..:||:..:|....|:
Mouse  1161 GLMYINESTVIMAYLFTIFNSLQGMFIFIFHCVLQKKVRK 1200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11318NP_651842.3 GPS 437..475 CDD:280071 13/46 (28%)
7tm_4 500..750 CDD:304433 69/266 (26%)
Adgrl3XP_011247763.1 Gal_Lectin 111..191 CDD:366935
OLF 205..461 CDD:128580
HormR 563..627 CDD:214468
GAIN 636..856 CDD:374574 46/294 (16%)
GPS 882..934 CDD:197639 18/68 (26%)
7tmB2_Latrophilin-3 942..1208 CDD:320671 73/284 (26%)
TM helix 1 945..969 CDD:320671 10/23 (43%)
TM helix 2 978..999 CDD:320671 5/21 (24%)
TM helix 3 1009..1031 CDD:320671 7/25 (28%)
TM helix 4 1050..1066 CDD:320671 3/18 (17%)
TM helix 5 1085..1108 CDD:320671 9/30 (30%)
TM helix 6 1141..1166 CDD:320671 11/24 (46%)
TM helix 7 1170..1195 CDD:320671 9/24 (38%)
Latrophilin 1208..1586 CDD:367050
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.