DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11318 and Pdfr

DIOPT Version :9

Sequence 1:NP_651842.3 Gene:CG11318 / 43678 FlyBaseID:FBgn0039818 Length:802 Species:Drosophila melanogaster
Sequence 2:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster


Alignment Length:660 Identity:137/660 - (20%)
Similarity:223/660 - (33%) Gaps:212/660 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 GGNLLPAD-VHMTGQMFGALMQQDKDATVSVDLVSVCKEIMSCD--------SKVLRLSAQLNAT 236
            ||.:..|| :|:...:.|.:              ::...|:.|.        :::||.|.....:
  Fly    51 GGRVRHADSLHIYYAVDGKM--------------TLLSNILDCGGCISAQRFTRLLRQSGSSGPS 101

  Fly   237 NS--LLSQFESYMDALPEQLVPKDRCGKVVAKPTS---------------DEAETATTGVETYNF 284
            .|  ....|||                |.:.:|||               |.:.|.:.|  ||..
  Fly   102 PSAPTAGTFES----------------KSMLEPTSSHSLATGRVPLLHDFDASTTESPG--TYVL 148

  Fly   285 SDIGVQALITGNISVFFANPECD--RITGLAIFSAPGDQRKTSASGFWYRFIRFSEDLAKVKEES 347
            ..:...|.:....:|..|.|:.|  ::.|....|||.:....||:.                  :
  Fly   149 DGVARVAQLALEPTVMDALPDSDTEQVLGNLNSSAPWNLTLASAAA------------------T 195

  Fly   348 NLETAAFLPENLWRQVKSRGATYLIFKVYAHDALFVETSLQRTRKPRSKVISISIPGLRSNYL-- 410
            |.|..:                          ||||..:|.:|             ||..|:.  
  Fly   196 NFENCS--------------------------ALFVNYTLPQT-------------GLYCNWTWD 221

  Fly   411 ------SLPLPFLLRNE---NLRNPDSKAFSIGSGC---GYWNYETWSTEGVSTESSSDLLKDAI 463
                  ..|...|.|..   .....|::.|:|.. |   |.|.....:|| |:....:|      
  Fly   222 TLLCWPPTPAGVLARMNCPGGFHGVDTRKFAIRK-CELDGRWGSRPNATE-VNPPGWTD------ 278

  Fly   464 IECHTNHLTQFAFLVGGSYRANDLGEEI--LITPINEKVLD----------IISIVGCSLSLLGI 516
                          .|..|:     .||  |:..:..|..|          .:.|||..|||..:
  Fly   279 --------------YGPCYK-----PEIIRLMQQMGSKDFDAYIDIARRTRTLEIVGLCLSLFAL 324

  Fly   517 LGIFLTAALFKSWRSQASTKVLLHLCLAMCLQMMLFVFLNTDDV----SEAL------VVNGNTV 571
            :...|....|:|.|:. .||:..:|.:||.||:::.:.|..|..    .||.      |:.....
  Fly   325 IVSLLIFCTFRSLRNN-RTKIHKNLFVAMVLQVIIRLTLYLDQFRRGNKEAATNTSLSVIENTPY 388

  Fly   572 RCVALGAAMQYSILVLFSWMLIIAFLQFQRYVTVIGIER--PPRYILKAAIVAWLLPLVPTLLVA 634
            .|.|....::|:...:|.||.|.. |.....|||...:.  |.::..:   :.|.:|::.|.:.|
  Fly   389 LCEASYVLLEYARTAMFMWMFIEG-LYLHNMVTVAVFQGSFPLKFFSR---LGWCVPILMTTVWA 449

  Fly   635 LIDPDSYVPSAAQLSTDTGIC--------YPSGYGLIFGVVLPVTLITVCNLVIFVYVFYSISHS 691
            ..       :...:.|..|.|        |   |.::.|..|.|.|:..|.||..:.|   :...
  Fly   450 RC-------TVMYMDTSLGECLWNYNLTPY---YWILEGPRLAVILLNFCFLVNIIRV---LVMK 501

  Fly   692 LSQSIHKNEKKMVVKQIRLSIMLFFLLGLTWIFGIFAFMQAGVAF---SYLFCITATMQGFVMFI 753
            |.|| ..::.:...|.:|.:|:|..|||:|.:....|.::....|   ||......:.|||.:.:
  Fly   502 LRQS-QASDIEQTRKAVRAAIVLLPLLGITNLLHQLAPLKTATNFAVWSYGTHFLTSFQGFFIAL 565

  Fly   754 YFVLLDSTNR 763
            .:..|:...|
  Fly   566 IYCFLNGEVR 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11318NP_651842.3 GPS 437..475 CDD:280071 7/40 (18%)
7tm_4 500..750 CDD:304433 69/282 (24%)
PdfrNP_001245501.1 HRM 213..272 CDD:280888 14/60 (23%)
7tm_4 306..563 CDD:304433 69/275 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462152
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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