DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mayo and Adgrg3

DIOPT Version :10

Sequence 1:NP_651842.3 Gene:Mayo / 43678 FlyBaseID:FBgn0039818 Length:802 Species:Drosophila melanogaster
Sequence 2:XP_038954076.1 Gene:Adgrg3 / 291854 RGDID:1305674 Length:574 Species:Rattus norvegicus


Alignment Length:421 Identity:94/421 - (22%)
Similarity:175/421 - (41%) Gaps:90/421 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   395 SKVISISIPGLRSNYLSLPLPFLLRNENLRNPDSKAFSIGSGCGYWNYE--TWSTEGVSTESSSD 457
            ::::.:|:..:.:..||.|:.....::: ::|     ::...|.:|:..  .|.:.|.|||..  
  Rat   209 NRMVGLSVGQMHATGLSEPVEITFSHQH-QSP-----NVILTCVFWDMAKGDWDSHGCSTEPG-- 265

  Fly   458 LLKDAIIECHTNHLTQFAFLVGGSYRANDLGEEILITPINEKVLDIISIVGCSLSLLGILGIFL- 521
               |....|..:|||.||.|:..:           :.....:.|..||..|.::|:     ||| 
  Rat   266 ---DGRTVCRCDHLTFFALLLRPT-----------LDQATARTLTRISQAGSAVSM-----IFLA 311

  Fly   522 -TAALFKSWR-------SQASTKVLLHLCLAMCLQMMLFVFL-NTDDVSEALVVNGNTVRCVALG 577
             |..|:.::|       |:.:.|:  |:.|:..|.::...|| |....|:     |....|....
  Rat   312 FTMVLYVAFRFSLQRFKSEDAPKI--HMALSTSLFLLNLTFLINVGSGSQ-----GPPASCWVRA 369

  Fly   578 AAMQYSILVLFSWMLIIAFLQFQRYVTVIGIERP--PRYILKAAIVAWLLPLVPTLLVALIDPDS 640
            |...|.:|.:|:||.:.|   |..|:.||.:...  ..|.||.:::.|.||::  :::.:...:|
  Rat   370 AIFHYFLLCVFTWMGLEA---FHLYLLVIKVFNTYFGHYFLKLSLLGWGLPVL--IVIGVGSSNS 429

  Fly   641 ---YVPSAAQLSTDTGICY----PSGYGLIFGVVLPVTLITVCNLVIFVYVFYSISHSLSQSIHK 698
               |.....:..|...:|:    |:.|..:.|..|...|.....|.:..:..:::....:.....
  Rat   430 YGVYTIRDQENRTSLELCWFQKEPALYATVHGYFLVTFLFGAVVLAMVAWKIFTLPSVTAGKGQG 494

  Fly   699 NEKKMVVKQIRLSIMLFFLLGLTWIFGIFAFMQAGVAFSYLFCITATMQGFVMFIYFVLLDSTNR 763
            ...|.|:..:.||    .|:|:||  |:......|::..|:|.:..::||..:|.:|::      
  Rat   495 QTWKSVLTVLGLS----SLVGMTW--GLAVLTPLGLSTVYIFTLLNSLQGLFIFCWFII------ 547

  Fly   764 RLWVGLICPTKMELDVQKRTTELQSMTTSST 794
                 |..||             ||.||||:
  Rat   548 -----LYFPT-------------QSTTTSSS 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MayoNP_651842.3 7tmB2_Adhesion 498..766 CDD:320168 65/286 (23%)
TM helix 1 500..525 CDD:320168 9/26 (35%)
TM helix 2 535..557 CDD:320168 6/22 (27%)
TM helix 3 574..600 CDD:320168 7/25 (28%)
TM helix 4 615..635 CDD:320168 5/19 (26%)
TM helix 5 659..688 CDD:320168 5/28 (18%)
TM helix 6 704..730 CDD:320168 8/25 (32%)
TM helix 7 734..759 CDD:320168 6/24 (25%)
Adgrg3XP_038954076.1 GPS 244..282 CDD:460350 14/42 (33%)
7tm_GPCRs 292..551 CDD:475119 66/292 (23%)
TM helix 1 295..319 CDD:410628 10/28 (36%)
TM helix 2 333..354 CDD:410628 6/22 (27%)
TM helix 3 366..388 CDD:410628 7/24 (29%)
TM helix 4 408..424 CDD:410628 4/17 (24%)
TM helix 5 454..475 CDD:410628 4/20 (20%)
TM helix 6 500..522 CDD:410628 8/27 (30%)
TM helix 7 524..549 CDD:410628 6/35 (17%)

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