DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mayo and Adgre5

DIOPT Version :10

Sequence 1:NP_651842.3 Gene:Mayo / 43678 FlyBaseID:FBgn0039818 Length:802 Species:Drosophila melanogaster
Sequence 2:NP_001401225.1 Gene:Adgre5 / 26364 MGIID:1347095 Length:877 Species:Mus musculus


Alignment Length:931 Identity:192/931 - (20%)
Similarity:319/931 - (34%) Gaps:307/931 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CAGLFVVLALVS------------------PIYSACPKENQMCLRNGTFQYCDGEERNSSDELMQ 52
            |.||.||..|:|                  ||.|.| ..|:.|:....|        :|..||:.
Mouse     6 CPGLLVVCILLSLSGAGTQKAESKNCAKWCPINSKC-VSNRSCVCKPGF--------SSEKELIT 61

  Fly    53 THLVYCTSM--------------FCEPEEFQHDYIT----------------------------- 74
            .....|..:              .|:..|..:..:.                             
Mouse    62 NPAESCEDINECLLPGFSCGDFAMCKNSEGSYTCVCNLGYKLLSGAESFVNESENTCQDVNECIS 126

  Fly    75 -RNHDQTPHQNKWKRARIGERATLHDVCLLRNGM---------PVTRECRVKDNRANWESTEHWD 129
             :||   .||:.....::|..:     |:.|.|.         ||:..|...|..::.:...| :
Mouse   127 GQNH---CHQSTHCINKLGGYS-----CICRQGWKPVPGSPNGPVSTVCEDVDECSSGQHQCH-N 182

  Fly   130 PVVCLRRFREHTISGDLNSLHDDVLEGRRRTNDTQGRREMTGIMRNMFRQRGG------------ 182
            ..||     ::|:             |..:.:...|.:..:|.:|       |            
Mouse   183 STVC-----KNTV-------------GSYKCHCRPGWKPTSGSLR-------GPDTICQEPPFPT 222

  Fly   183 -NLLPADVHMTGQMFGA----LMQQDKDATVSV---DLVSVCKEIMS--CDSKVLRLSAQLNATN 237
             .|||.....|...|..    |::....|||:.   .|:....:::.  .:::..:::||     
Mouse   223 WTLLPTAHSQTLLRFSVEVQNLLRDFNPATVNYTIQKLIEAVDKLLEDPMETETQQVAAQ----- 282

  Fly   238 SLLSQFESYMDALPEQLVPK----------DRCGKVVAKPTSDEAETATTGVETYNFSDIGVQ-- 290
             |||..|..:..| .|.:||          .....:|.:..:.:..|...| :|:...|..|.  
Mouse   283 -LLSNLEQSLRTL-AQFLPKGPFTYTSPSNTELSLMVKEQDNKDVTTVHHG-QTWMELDWAVTAG 344

  Fly   291 ALITGN---ISVFFANPECDRITGLAIFSAPGDQRKTSASGFWYRFIRFSEDLAKVKEESNLETA 352
            |.|:.|   ::...::|..:::.|....:.  :||:.|...|:...|    ....:|..||:.:.
Mouse   345 AKISENGSSVAGILSSPNMEKLLGNTPLNL--EQRRASLEDFYGSPI----PSVSLKLLSNINSV 403

  Fly   353 AFLPENLWRQVKSRGATYLIFKVYAHDALFVETSLQRTRKPRSKVISISIPGLRSNYLSLPLPFL 417
            .....|     ..:.|:.:.||       |..||:: :.:||.::|                   
Mouse   404 FLTNTN-----TEKLASNVTFK-------FDFTSVE-SIEPRHELI------------------- 436

  Fly   418 LRNENLRNPDSKAFSIGSGCGYWNYET----WSTEGVSTESSSDLLKDAIIECHTNHLTQFAFLV 478
                               |.:|....    |.|:|.|...:.        .||.||||.||.|:
Mouse   437 -------------------CAFWKAHNGNGYWDTDGCSMNGTG--------FCHCNHLTSFAILM 474

  Fly   479 GGSYRANDLGEEILITPINEKVLDIISIVGCSLSLLGILGIFLTAALFKSWRSQASTKVLLHLCL 543
             ..|...|            ..|::|:.||..|||:.:|...||..|.|..:| :.|.|.||||:
Mouse   475 -AQYHVQD------------PRLELITKVGLLLSLICLLLCILTFLLVKPIQS-SRTMVHLHLCI 525

  Fly   544 AMCLQMMLFVFLNTDDVSEALVVNGNTVRCVALGAAMQYSILVLFSWMLIIAFLQFQRYVTVIGI 608
            .:.|..::|:....::..|.      .:||..:...:.:..|..|.||   |....:.|..|:  
Mouse   526 CLFLGSIIFLVGVENEGGEV------GLRCRLVAVMLHFCFLAAFCWM---ALEGVELYFLVV-- 579

  Fly   609 ERPPRYILKAAIVAWLLPL----VPTLLVALIDPDSYVPSAAQLSTDTGICYPSGY--------- 660
                |......:..|...|    ||.|:||:        |.|.:..|       ||         
Mouse   580 ----RVFQGQGLSTWQRCLIGYGVPLLIVAI--------SMAVVKMD-------GYGHATYCWLD 625

  Fly   661 ----GLIFGVVLPVTLITVCNLVIFVYVFYSISHSLSQSIHKNEKKMVVKQIRL----SIMLFFL 717
                |.::....||..|..||..|||...:.::...|: |:.|.||:  ::.|:    ||....:
Mouse   626 FRKQGFLWSFSGPVAFIIFCNAAIFVITVWKLTKKFSE-INPNMKKL--RKARVLTITSIAQLLV 687

  Fly   718 LGLTWIFGIFAFMQAGVAFSYLFCITATMQGFVMFIYFVLLDSTNRR---LWVGLICPTKMELDV 779
            ||.||.||:|.|.......||:|.:...:||..:::...||:...|.   .|..::..:|.    
Mouse   688 LGCTWGFGLFLFNPHSTWLSYIFTLLNCLQGLFLYVMLCLLNKKVREEYWKWACMVTGSKY---- 748

  Fly   780 QKRTTELQSMTTSSTNYNSRS 800
                ||..|.||.:....:|:
Mouse   749 ----TEFNSSTTGTGTSQTRN 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MayoNP_651842.3 7tmB2_Adhesion 498..766 CDD:320168 77/291 (26%)
TM helix 1 500..525 CDD:320168 10/24 (42%)
TM helix 2 535..557 CDD:320168 8/21 (38%)
TM helix 3 574..600 CDD:320168 5/25 (20%)
TM helix 4 615..635 CDD:320168 6/23 (26%)
TM helix 5 659..688 CDD:320168 11/41 (27%)
TM helix 6 704..730 CDD:320168 10/29 (34%)
TM helix 7 734..759 CDD:320168 6/24 (25%)
Adgre5NP_001401225.1 EGF_CA 69..97 CDD:429571 2/27 (7%)
EGF_CA 120..151 CDD:429571 7/38 (18%)
EGF_CA 169..200 CDD:429571 6/49 (12%)
GPS 436..473 CDD:460350 15/82 (18%)
7tm_GPCRs 481..745 CDD:475119 79/309 (26%)
TM helix 1 484..508 CDD:410628 10/23 (43%)
TM helix 2 517..538 CDD:410628 8/20 (40%)
TM helix 3 550..572 CDD:410628 5/24 (21%)
TM helix 4 591..607 CDD:410628 6/23 (26%)
TM helix 5 628..651 CDD:410628 7/22 (32%)
TM helix 6 678..700 CDD:410628 9/21 (43%)
TM helix 7 704..729 CDD:410628 6/24 (25%)

Return to query results.
Submit another query.