DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11318 and Adgrf5

DIOPT Version :9

Sequence 1:NP_651842.3 Gene:CG11318 / 43678 FlyBaseID:FBgn0039818 Length:802 Species:Drosophila melanogaster
Sequence 2:XP_038938942.1 Gene:Adgrf5 / 245977 RGDID:621679 Length:1426 Species:Rattus norvegicus


Alignment Length:750 Identity:165/750 - (22%)
Similarity:273/750 - (36%) Gaps:211/750 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 EMTGIMRNMFRQRGGNLLPADVHMTGQMFGALMQQDKDATVSV---DLVSVCKEIMSCDSKVLRL 229
            :..|:.|:..:..||.       :|.:..|:..:::..|.:|.   .|:.:.|.::...|:..:|
  Rat   765 QFAGVSRSPGQTIGGT-------VTYKCVGSQWKEETRACISAPINGLLQLAKALIKSPSQDQKL 822

  Fly   230 SAQLNATNSLLSQFESYMDALPEQLVPKDRCGKVVAKPTSDEAETATTGVETYNFSDIGVQALIT 294
            ...|...:....:.|..:.:.|..|      |.:::  ..|...|..|.|.:....||    |.|
  Rat   823 PKYLRDLSVSTGKEEQDIRSSPGSL------GAIIS--ILDLLSTVPTQVNSEMMRDI----LAT 875

  Fly   295 GNISVFFANPECDRITGLAIFSAPGDQRKTSASGFWYRFIRFSEDLAKVKEESNLETAAFL-PEN 358
            .|:.:       |:.| |..:.....|:...:|.|.....|||:.|     |....|..|| ..|
  Rat   876 INVIL-------DKST-LNSWEKLLQQQSNQSSQFLQSVERFSKAL-----ELGDSTPPFLFHPN 927

  Fly   359 LWRQVKS----RGATYLIFKVYAHDALFVETSL----------QRTRKPRSKVISISIPGLRS-- 407
            :  |:||    ||..    ::|....:|.::.|          ..:.:|.|.:::::.|.|::  
  Rat   928 V--QMKSMVIKRGHA----QMYQQKFVFTDSDLWGDVAIDECQLGSLQPDSSIVTVAFPTLKAIL 986

  Fly   408 ---NYLSLPLPFLLRNENLRNPDSKAFSIG--------SG----CGYWNYET------WSTEGVS 451
               .....|...|:....:.:...|.|.|.        ||    |.:||:..      |.:.|.:
  Rat   987 AQDGQRKTPSNSLVMTTTVSHNIVKPFRISMTFKNNHRSGGKPQCVFWNFSLANNTGGWDSSGCT 1051

  Fly   452 TESSSDLLKDAIIECHTNHLTQFAFLVGGSYRANDLGEEILITPINEKVLDIISIVGCSLSLLGI 516
            .|......:|.:. |..||||.|:.|:  |..:.|.|..:.|      :|||||.:|...|::.:
  Rat  1052 VEDDGRDNRDRVF-CKCNHLTSFSILM--SPDSPDPGSLLKI------LLDIISYIGLGFSIVSL 1107

  Fly   517 LGIFLTAALFKSWRS--QASTKVLLHLC---LAMCLQMMLFVFLNTDDVSEALVVNG----NTVR 572
            ....:..|:.  |:|  :..|..:.|:|   :|:||.:....|:    |:.| :.:|    |...
  Rat  1108 AACLVVEAMV--WKSVTKNRTSYMRHICIVNIALCLLIADIWFI----VAGA-IHDGHYPLNETA 1165

  Fly   573 CVALGAAMQYSILVLFSWMLIIAFLQFQRYVTVIGIERPPRYILKAAIVAWLLPLVPTLLVALID 637
            |||....:.:..|.:|.|||.:..:.|.|.:                                  
  Rat  1166 CVAATFFIHFFYLSVFFWMLTLGLMLFYRLI---------------------------------- 1196

  Fly   638 PDSYVPSAAQLSTDTGICYPSGYG-------LIFGV--------------------------VLP 669
               ::...|..||...|.:..|||       :..||                          .:|
  Rat  1197 ---FILHDASKSTQKAIAFSLGYGCPLIISSITVGVTQPQEVYMRKNACWLNWEDTRALLAFAIP 1258

  Fly   670 VTLITVCNLVIFVYVFYSISH-SLSQSIHKNEKKMVVKQIRLSI-MLFFLLGLTWIFGIFAFMQ- 731
            ..:|.|.|:.|.|.|...|.. |:.....|.||..:. ||..|| :|..||||||.||:...:| 
  Rat  1259 ALIIVVVNVSITVVVITKILRPSVGDKPGKQEKSSLF-QISKSIGVLTPLLGLTWGFGLATVIQG 1322

  Fly   732 AGVAFSYLFCITATMQGFVMFIYFVLLD-----------STNRRLW---------VGLICPT-KM 775
            :...|..:|.:....||..:.::..|.|           |.:|  |         :|...|. .|
  Rat  1323 SNAVFHIIFTLLNAFQGLFILLFGCLWDQKVQEALLHKFSLSR--WSSQHSKSTSLGSSTPVFSM 1385

  Fly   776 ELDVQKRTTEL----------QSMTTSSTNYNSRS 800
            ...:.:|...|          ...||||:..||.|
  Rat  1386 SSPISRRFNNLFGKTGTYNVSTPETTSSSVENSSS 1420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11318NP_651842.3 GPS 437..475 CDD:280071 12/43 (28%)
7tm_4 500..750 CDD:304433 70/294 (24%)
Adgrf5XP_038938942.1 FR3 592..622 CDD:409353
Ig strand E 602..608 CDD:409353
Ig strand F 616..623 CDD:409353
CDR3 623..632 CDD:409353
GPS 1029..1076 CDD:396408 13/47 (28%)
7tm_GPCRs 1090..1363 CDD:421689 73/323 (23%)
TM helix 1 1091..1116 CDD:410628 7/24 (29%)
TM helix 2 1131..1153 CDD:410628 7/25 (28%)
TM helix 3 1167..1190 CDD:410628 7/22 (32%)
TM helix 4 1210..1226 CDD:410628 4/15 (27%)
TM helix 5 1248..1271 CDD:410628 5/22 (23%)
TM helix 6 1295..1320 CDD:410628 13/25 (52%)
TM helix 7 1325..1350 CDD:410628 5/24 (21%)
SEA 181..273 CDD:396113
IG 298..372 CDD:214652
Ig_3 548..621 CDD:404760
FR1 548..567 CDD:409353
Ig strand A 548..551 CDD:409353
Ig strand A' 555..557 CDD:409353
Ig strand B 561..568 CDD:409353
CDR1 568..575 CDD:409353
Ig strand D 591..598 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.