DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11318 and Adgrg4

DIOPT Version :9

Sequence 1:NP_651842.3 Gene:CG11318 / 43678 FlyBaseID:FBgn0039818 Length:802 Species:Drosophila melanogaster
Sequence 2:NP_001349814.1 Gene:Adgrg4 / 236798 MGIID:2685213 Length:3025 Species:Mus musculus


Alignment Length:761 Identity:175/761 - (22%)
Similarity:302/761 - (39%) Gaps:155/761 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 DQTPHQNK--WKRARIGERATLHDVCLLRNGMPVTREC--RVKDNRANWESTEHWDPVVCLRRFR 138
            |:||.:.|  :|........|..:.|:.......||.|  .::..:..||..          |.:
Mouse  2292 DETPSKYKGTYKWPLTDPTETAQERCIKNENRNATRICSISIQTGKCQWEKP----------RLK 2346

  Fly   139 EHTISGDLNSLHDDVLEGRRRTNDTQGRREMTGIMRNMFRQRGGNLLPADVHMTGQMFGALMQQD 203
            :..:   |..|.|.:::....|...:...::...:.|:..:..    |.|              :
Mouse  2347 QCKL---LQGLPDKIVDLANITISDENADDVAEHILNLVNESP----PLD--------------E 2390

  Fly   204 KDATVSVDLVSVCKEIMSCDSKVLRLS----AQLNATNSLLSQFESYMDALPEQLVPKDRCGKVV 264
            ::..:   :||...:|.:||...:.|:    ..||......|...|.:..:..:::   |..:.|
Mouse  2391 EETKI---IVSKVADISNCDEISINLTQIILQILNTVTEKQSDSASNLPPVSNEIL---RIIERV 2449

  Fly   265 AKPTSDEAETATTGVETYNFSDIGVQALITGNISVFFANPECDRITGLAIFSAPGDQRKTSASGF 329
            .........||...|.....:.:.|.....|   :.|:....:.:....||......||..||  
Mouse  2450 GHKMEFAGRTANLTVAKLALAVLRVDHKFEG---MAFSIQSSEEVIAPQIFLGDIPLRKALAS-- 2509

  Fly   330 WYRFIRFSEDLAKVKEESNLETAAFLPENLWRQVKSRGATYLIFKVYAHDALFVETSLQRTRKPR 394
                                   .:||::|..:|...|...::|..:...:||...::  |.:..
Mouse  2510 -----------------------IYLPKSLREKVPLDGLQTILFNFFGQTSLFKAKTI--TSELM 2549

  Fly   395 SKVISISIPGLRSNYLSLPLPFLLRN-ENLRNPDSKAFSIGSGCGYWNYET------WSTEGVST 452
            :.|:|.||.......|:.|:..:|:: :...|.|...      |.:|:::|      |:..|.. 
Mouse  2550 TYVVSASISNTSIQNLADPVIIILKHIQGDWNYDQVY------CAFWDFDTNNGLGGWNPSGCK- 2607

  Fly   453 ESSSDLLKDAIIE---CHTNHLTQFAFLVGGSYRANDLGEEILITPINEKVLDIISIVGCSLSLL 514
                  ||::.|.   |..||||.|..|:       ||... .:..:||::|.||:..||.:|.:
Mouse  2608 ------LKESNINYTICQCNHLTHFGVLM-------DLSRS-TVDAVNERILVIITYTGCGISSI 2658

  Fly   515 GILGI-FLTAALFKSWRSQASTKVLLHLCLAMCLQMMLFVFLNTDDVSEALVVNGNTVRCVALGA 578
             .||| .:|...|...|....:|:|::||.|:.:..:.|:      |:..|........|:....
Mouse  2659 -FLGIAMVTYIAFHKLRKDYPSKILINLCTALLMLNLAFL------VNSWLTSFQKVGLCITAAV 2716

  Fly   579 AMQYSILVLFSWM------LIIAFLQ-FQRYVTVIGIERPPRYILKAAIVAWLLPLVPTLLVALI 636
            |:.|.:||..:||      :..|.:: |..|:        |.||||..:..|.:|.:...::..:
Mouse  2717 ALHYFLLVSLTWMGLEAVHMYFALVKVFNTYI--------PNYILKFCLAGWGIPAITVAIILSV 2773

  Fly   637 DPDSYVPSAAQLSTDTGICYPSGYGLIF-GVVLPVTLITVCNLVIFVYVFYSISHSLSQSIHKNE 700
            ..|.|    ..||..|..|:.....:.: .||....||.:.||.:|..|...::...||| .|..
Mouse  2774 RKDLY----GTLSPTTPFCWIKDDHIFYISVVAYFCLIFLMNLSMFCTVLVQLTSVKSQS-QKTR 2833

  Fly   701 KKMVVKQIRLSIMLFFLLGLTWIFGIFAFMQAGVAFSYLFCITATMQGFVMFIYFVLLDSTNRRL 765
            |||::..::.:|.|.|||||||.|..||:....:.|.|||.|..|:|||::|:::.::..:.|..
Mouse  2834 KKMILNDLKGTISLTFLLGLTWGFAFFAWGPVRIFFLYLFAICNTLQGFLIFVFYCVMKESVREQ 2898

  Fly   766 W-VGLICP-TKME-----LDV---QKR----------TTELQSMTT 791
            | :.|.|. .::|     ::|   |||          |..|.|.||
Mouse  2899 WHMPLHCRWLRLENFAGWINVRHKQKRLKKNNESKLLTPSLMSTTT 2944

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11318NP_651842.3 GPS 437..475 CDD:280071 13/46 (28%)
7tm_4 500..750 CDD:304433 78/258 (30%)
Adgrg4NP_001349814.1 LamG <54..162 CDD:328935
DnaJ <276..746 CDD:333066
GPS 2587..2629 CDD:307782 14/48 (29%)
7tmB2_GPR112 2642..2903 CDD:320663 83/280 (30%)
TM helix 1 2644..2669 CDD:320663 10/25 (40%)
TM helix 2 2679..2701 CDD:320663 7/27 (26%)
TM helix 3 2712..2739 CDD:320663 6/26 (23%)
TM helix 4 2754..2770 CDD:320663 3/15 (20%)
TM helix 5 2793..2816 CDD:320663 6/22 (27%)
TM helix 6 2838..2863 CDD:320663 12/24 (50%)
TM helix 7 2867..2892 CDD:320663 10/24 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I6570
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12011
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5250
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.040

Return to query results.
Submit another query.