DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11318 and mth-2

DIOPT Version :9

Sequence 1:NP_651842.3 Gene:CG11318 / 43678 FlyBaseID:FBgn0039818 Length:802 Species:Drosophila melanogaster
Sequence 2:NP_001364698.1 Gene:mth-2 / 173752 WormBaseID:WBGene00017947 Length:971 Species:Caenorhabditis elegans


Alignment Length:720 Identity:140/720 - (19%)
Similarity:228/720 - (31%) Gaps:236/720 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 TVSVDLVSVCKEIMSCDSKVLRLSAQLNATNSLLSQFESYMDALPEQLVPKDRCGKVVAKPTSDE 271
            :.|....|......|..:....::...|||:|..|...|   ..||   |:......|..||...
 Worm   271 STSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTS---PTPE---PEPTTTATVLAPTLKN 329

  Fly   272 AETATTGV--------ETYNFSDIG--VQALITGNISVFFAN----PECDRITGLAIF------- 315
            ...:..|:        ||..:|::|  :.|.....||....|    |.......:||.       
 Worm   330 LSDSGVGINNVSTVLNETLTYSEMGANLNATQVAEISTILINSANVPGLTAENSMAILHNLDNML 394

  Fly   316 ------------SAPG-------------DQR--------------------------------- 322
                        ||.|             |||                                 
 Worm   395 YVSPTIMYQSGNSAQGVLNSLGTMVDNTVDQRIEYLNGQNLGFSSKRLDCSNLGADDGLLDLGSK 459

  Fly   323 -----KTSASGFWYRFIRFSEDLAKVKEESNLETAAFLPENLWRQVKSRGATYLIFKVYAHDALF 382
                 .|.:.|.|:..:....||...::.|                      ::.|.:|...:||
 Worm   460 FELINSTDSLGKWHSILVPLSDLCSTQDLS----------------------HVFFTIYRDTSLF 502

  Fly   383 VETSLQRT--------------------RKPRSKVISISIP-GLRSNYLSLPLPFLLRNENL-RN 425
            |.....||                    |.|||.....:.| .:.:...::||....|..:| ..
 Worm   503 VGPQQYRTYTGTNKPISSGEAETYTPPPRVPRSAGFYEAEPYQMNATSQTVPLSPCARQTSLPPT 567

  Fly   426 PDSKAFSIGSGCG--------------------------------YWNY--ETWSTEGVSTESSS 456
            |...|..:.:|..                                :|:.  ..|: |....|..|
 Worm   568 PVMSATVMNNGVAVSVSATSEATMALLRFNISTLMKPLHGNLKVTWWDIGRNAWA-EDRQCEIVS 631

  Fly   457 DLLKDAIIECHTNHLTQFAFLVGGSYRANDLGEEILITPINEKVLDIISIVGCSLSLLGILGIFL 521
            :  .|.|:|....|||.||.:|..:....::.:..|||      |..: :.|.|:..|..|..|.
 Worm   632 E--SDGILEARCTHLTDFAIIVDAALNDPNVCDNALIT------LGYV-VNGLSIVSLAFLTFFS 687

  Fly   522 TAALFKSW-RSQASTKVLLH-------LCLAMCLQMMLF-----VFLNTDDVSEALVVNGNTVRC 573
            .:|...|. .|:..:.|..|       |.|.....::||     ||.|.|       |:|:  .|
 Worm   688 ISAYINSLANSRLYSYVRGHNLARRDFLALIYHFDLLLFYVFFTVFSNQD-------VSGD--MC 743

  Fly   574 VALGAAMQYSILVLFSWMLIIAFLQFQRYVTVIGIERPPRYILKAAIVAWLLPLVPTLLVALIDP 638
            .|: ||:.|::|:...::.|     ||....::.....|.|    .::......||.|:.::..|
 Worm   744 TAM-AAVMYALLLCSLFLTI-----FQALRNILVFLPTPAY----RLLNICFGTVPVLITSVALP 798

  Fly   639 DSYVPSAAQL------STDTGICYPSGYGLIFGVVLPVTLI----TVCNLVIFVYVFYSISHSLS 693
              ::.|...|      ......|:.....::..:::|||::    .||...:...||..:....|
 Worm   799 --FILSIFLLVFTKFFDRQDCFCWVRPDYIVAAIIIPVTVLLLSTVVCTSFMIYKVFCGMKRKFS 861

  Fly   694 QSIHKNEKKMVVKQIRLSIMLFFLLGLTWIFGIFAFMQAGVAFS-------YLFCITATMQGFVM 751
            |..|..:..::.|.:.:.:|. ..|||.||      :|.|..:|       |.|.|....||.::
 Worm   862 QGGHHYDPNVITKIVSIVVMQ-ISLGLPWI------LQFGTLYSPYTTFWHYTFTIVLGSQGTIL 919

  Fly   752 FIYFV 756
            .:.|:
 Worm   920 LLIFL 924

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11318NP_651842.3 GPS 437..475 CDD:280071 11/71 (15%)
7tm_4 500..750 CDD:304433 64/279 (23%)
mth-2NP_001364698.1 GPS 607..656 CDD:197639 14/51 (27%)
7tm_GPCRs 662..933 CDD:421689 68/298 (23%)
TM helix 1 664..690 CDD:410628 9/32 (28%)
TM helix 2 706..735 CDD:410628 7/28 (25%)
TM helix 4 779..803 CDD:410628 4/25 (16%)
TM helix 5 824..852 CDD:410628 5/27 (19%)
TM helix 6 868..897 CDD:410628 9/35 (26%)
TM helix 7 902..927 CDD:410628 6/23 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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