DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mayo and adgrl1

DIOPT Version :10

Sequence 1:NP_651842.3 Gene:Mayo / 43678 FlyBaseID:FBgn0039818 Length:802 Species:Drosophila melanogaster
Sequence 2:XP_031755211.1 Gene:adgrl1 / 100488304 XenbaseID:XB-GENE-1012006 Length:1452 Species:Xenopus tropicalis


Alignment Length:759 Identity:168/759 - (22%)
Similarity:267/759 - (35%) Gaps:195/759 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 PEEFQHDYITRNHDQTPHQNK---WKRAR----------IGERATLHDVCLLRNGM-----PVTR 111
            |...||.|...|  ..|.:.:   |..|:          .|.|.|...:||...|:     |...
 Frog   469 PPSNQHSYSEVN--CPPREERRVQWPAAQQGMLVERPCPKGTRGTASFLCLPTLGVWNPRGPDLS 531

  Fly   112 ECRVKDNRANWESTEHWDPVVCLRRFREHTISGDLNSLHDDVLEGRRRTNDTQGRREMTGIMRNM 176
            .|           |..|                 :|.:...:..|....|          |...:
 Frog   532 NC-----------TSPW-----------------VNQVAQKIKSGENAAN----------IAGEL 558

  Fly   177 FRQRGGNLLPADVHMTGQMFGALMQQDKDATVSVDLVSVCKEIMSCDSKVLR------LSAQLNA 235
            .|           |..||::..      |.|.||.|:....:|:....:.||      .....|.
 Frog   559 AR-----------HTRGQIYAG------DVTSSVRLLDQLLDILDAQLQALRPVERESAGKNYNR 606

  Fly   236 TNSLLSQFESYMDALPEQLVPKDRCGKVVAKPT-----SDEAETATTGVETYNFSDIGVQA--LI 293
            .:......:.|:.|:.|.:   |...:..|.|:     ..|.|.|.|     ...||..:.  |:
 Frog   607 MHKRERTCKDYIKAVVETV---DNLLRPEALPSWRDMNVTEQEHAAT-----MLLDILEEGAFLL 663

  Fly   294 TGNIS--VFFANPECDRITGLAIFSAPGDQRKTSASGFWYRFIRFSEDLAKVKEESNLETAAF-L 355
            ..|:.  ..|.....:.:..:::.:..|...:          :.|.:|        ||..::. |
 Frog   664 ADNVKEPARFQTARPNVVLEVSVVNTEGSVTE----------LIFPQD--------NLSLSSIQL 710

  Fly   356 PENLWRQVKSRGATYLIFKVYAHDALFVETSLQRTRK------------PRSKVISISIPGLRSN 408
            ..|..:|....|...::|.:|.:..||:.|.....|.            ..|::|:.||....|.
 Frog   711 SANSIKQNSRNGVVKVVFVLYNNLGLFLSTENSTVRNGGESSSTGHSLVVNSQIIAASINKESSR 775

  Fly   409 -YLSLPLPFLLRNENLRNPDSKAFSIGSGCGYWNYET------WSTEG---VSTESSSDLLKDAI 463
             :|..|:.|.|.:...:|      ...:.|.:|||..      ||::|   |.|..:.       
 Frog   776 VFLMDPVIFTLPHLQTKN------HFNANCTFWNYSERSMLGYWSSQGCRLVQTNKTH------- 827

  Fly   464 IECHTNHLTQFAFLVGGSYRANDLGEEILITPINEKVLDIISIVGCSLSLLGILGIFLTAALFKS 528
            ..|..:|||.||.|:  ::|....|.      |||.:|.:||.||..:||: .|||.::...|..
 Frog   828 TTCACSHLTNFAVLM--AHRDMYQGR------INELLLSVISWVGIVISLV-CLGICISTFCFLR 883

  Fly   529 WRSQASTKVLLHLCLAMCLQMMLFVFLNTDDVSEALVVNGNTVRCVALGAAMQYSILVLFSWMLI 593
            ........:..:||:::.|..:|  ||...|.::..||      |..|...:.:..|..|||:.:
 Frog   884 GLQTDRNTIHKNLCISLFLAELL--FLTGIDKTQYQVV------CPILAGLLHFFSLSAFSWLCL 940

  Fly   594 IAFLQFQRYVTVIGIERPPR-------YILKAAIVAWLLPLVPTLLVALIDPDSY-VPSAAQLST 650
            .....:...|.|...|...|       ||..|.:|.         :.|.:|..|| ...|..|..
 Frog   941 EGVQLYLMLVEVFETEHSRRKYYYLCGYIFPALVVG---------ISAAVDYRSYGTDKACWLRV 996

  Fly   651 DTGICYPSGYGLIFGVVLPVTLITVCNLVIFVYVFYSISHSLSQSIHKNEKKMVVKQIRL-SIML 714
            |       .| .|:..:.||:|:.|.||:|.:...:.:..|.|.....:.:...:|...| ::.|
 Frog   997 D-------NY-FIWSFIGPVSLVIVVNLLILLVTLHKMLRSSSVLKPDSSRLENIKSWALGAVTL 1053

  Fly   715 FFLLGLTWIFGIFAFMQAGVAFSYLFCITATMQGFVMFIYFVLL 758
            .|||||||.||.....:..:..:|||.....:||..:||:...|
 Frog  1054 LFLLGLTWAFGFLFINKESLVLAYLFTTFNALQGLFIFIFHCAL 1097

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MayoNP_651842.3 7tmB2_Adhesion 498..766 CDD:320168 73/270 (27%)
TM helix 1 500..525 CDD:320168 10/24 (42%)
TM helix 2 535..557 CDD:320168 6/21 (29%)
TM helix 3 574..600 CDD:320168 5/25 (20%)
TM helix 4 615..635 CDD:320168 3/19 (16%)
TM helix 5 659..688 CDD:320168 9/28 (32%)
TM helix 6 704..730 CDD:320168 12/26 (46%)
TM helix 7 734..759 CDD:320168 8/25 (32%)
adgrl1XP_031755211.1 Gal_Rha_Lectin_LPHN1 35..131 CDD:438701
OLF 142..404 CDD:470611
HormR 477..540 CDD:214468 14/92 (15%)
GAIN 550..771 CDD:465137 49/273 (18%)
GPS 795..846 CDD:197639 16/59 (27%)
7tmB2_Latrophilin-1 854..1111 CDD:320673 73/270 (27%)
TM helix 1 856..881 CDD:320673 10/25 (40%)
TM helix 2 890..912 CDD:320673 6/23 (26%)
TM helix 3 921..948 CDD:320673 5/26 (19%)
TM helix 4 960..980 CDD:320673 5/28 (18%)
TM helix 5 997..1026 CDD:320673 10/36 (28%)
TM helix 6 1042..1069 CDD:320673 12/26 (46%)
TM helix 7 1073..1098 CDD:320673 8/25 (32%)
Latrophilin 1110..1452 CDD:460538
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.