DRSC/TRiP Functional Genomics Resources

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Protein Alignment nkx6.1 and CG15696

DIOPT Version :10

Sequence 1:NP_001002475.1 Gene:nkx6.1 / 436748 ZFINID:ZDB-GENE-040718-178 Length:312 Species:Danio rerio
Sequence 2:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster


Alignment Length:163 Identity:42/163 - (25%)
Similarity:73/163 - (44%) Gaps:34/163 - (20%)


- Green bases have known domain annotations that are detailed below.


Zfish   107 GILSGLPRFSSLSPPPPPGLYFS-------PSAAAVAVARYPKPLTELPGRTPIF-WPGVMQSPH 163
            |:|..|.......|...|..|.|       |::||.|             :.|:: |   :|...
  Fly    25 GVLQRLRASLPFHPYAHPASYVSKESGGSPPASAAEA-------------QIPVYDW---LQYTR 73

Zfish   164 WRDARFACSPHQNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTES 228
            :...:...:..||:......|:.  .|..|:.||:.|||..::::.||:..:..:||.||.:|.:
  Fly    74 YHPPKLPRALRQNAPAKRTPGRL--PRIPFTPQQLQALENAYKESNYLSAEDANKLADSLELTNT 136

Zfish   229 QVKVWFQNRRTKWRKRHAAEMASAKKKQDSETE 261
            :||:||||||.:.|:.        |:::|...:
  Fly   137 RVKIWFQNRRARERRE--------KREKDESCD 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nkx6.1NP_001002475.1 Homeodomain 185..243 CDD:459649 22/57 (39%)
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 18/50 (36%)

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