Protein Alignment nkx6.1 and abd-A

DIOPT Version :10

• Sequence 1: NP_001002475.1
• Gene: nkx6.1 / 436748
• ZFINID: ZDB-GENE-040718-178
• Length: 312
• Species: Danio rerio
• Sequence 2: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Alignment Length: 316
• Identity: 79/316 - (25%)
• Similarity: 123/316 - (38%)
• Gaps: 72/316 - (22%)

Zfish    16 LLNTPPLAALHSMTEMKTPLYPAYPLSSTGPASSTSPTAT-----SPNPGGIPVSSPGIKTSSGL 75
            ||.|||.|......:           ||..|:.|.|.:::     :.|..|...:|.....:|.:
  Fly   186 LLLTPPSAGNSQAGD-----------SSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSV 239

Zfish    76 SALASAQQCAIATPHGINDILSRPSVACSPA--GILSGLPRFS-------------------SLS 119
            :|.|:|...|.::...|......|.|:..|:  |.|||:..|:                   |:|
  Fly   240 AAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMS 304

Zfish   120 PPPPPGLYF---------------SPSAAAVAVARYPKPLTE-----LPGRTPIFWPGVMQSPH- 163
            .|......|               :.||.|:.|.......|:     :||.......|:...|.
  Fly   305 VPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRY 369

Zfish   164 -WRD-ARFACSPHQNSVLLDKDG----KRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYS 222
             |.. ..:..||.:..|..|.:|    .|:..|.|::..|...|||.|....||....|..:|::
  Fly   370 PWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHA 434

Zfish   223 LGMTESQVKVWFQNRRTKWRKR-HAAEMASAKKKQDSE-------TERLKGASENE 270
            |.:||.|:|:||||||.|.:|. .|.:..:.:.::|.|       .|.:|.|.:|:
  Fly   435 LCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNK 490

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nkx6.1	NP_001002475.1	Homeodomain	185..243	CDD:459649	24/57 (42%)
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	23/55 (42%)
		Abdominal-A	456..478	CDD:403567	3/21 (14%)