Protein Alignment nkx6.1 and Ubx

DIOPT Version :10

• Sequence 1: NP_001002475.1
• Gene: nkx6.1 / 436748
• ZFINID: ZDB-GENE-040718-178
• Length: 312
• Species: Danio rerio
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 250
• Identity: 62/250 - (24%)
• Similarity: 102/250 - (40%)
• Gaps: 72/250 - (28%)

Zfish    40 PLSSTGPAS--STSPTATSPNPGGIPVSSPGIK----------TSSGLSALASAQQCAIATPHGI 92
            |:|..|.::  :.|.:..:.|.||:. |..|:.          |.||    |:||..|.::.|..
  Fly   175 PVSHRGGSAGGNVSVSGGNGNAGGVQ-SGVGVAGAGTAWNANCTISG----AAAQTAAASSLHQA 234

Zfish    93 NDILSRPSVA----C----SPAGILSGLPRFSSLSPPPPPGLYFSPSAAAVAVARYPKPLTELPG 149
            ::....|.:|    |    :.:.|.|.|.::..:|  ...|..:|.|.|...:
  Fly   235 SNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGIS--TDMGKRYSESLAGSLL------------ 285

Zfish   150 RTPIFWPGVMQSPHWRDARFACSPHQNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGP 214
                        |.|               |..:|.|:..|.|::..|...|||.|....||...
  Fly   286 ------------PDW---------------LGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRR 323

Zfish   215 ERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAKK--KQDSETERLKGAS 267
            .|..:|::|.:||.|:|:||||||.|.:|    |:.:.|:  :|:.:.:..|.|:
  Fly   324 RRIEMAHALCLTERQIKIWFQNRRMKLKK----EIQAIKELNEQEKQAQAQKAAA 374

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nkx6.1	NP_001002475.1	Homeodomain	185..243	CDD:459649	24/57 (42%)
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	23/55 (42%)