Protein Alignment nkx6.1 and zen

DIOPT Version :10

• Sequence 1: NP_001002475.1
• Gene: nkx6.1 / 436748
• ZFINID: ZDB-GENE-040718-178
• Length: 312
• Species: Danio rerio
• Sequence 2: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Alignment Length: 165
• Identity: 43/165 - (26%)
• Similarity: 73/165 - (44%)
• Gaps: 33/165 - (20%)

Zfish   171 CSP---HQNSVLLDK--------DGKR---KHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAY 221
            |||   ||..|..|:        |.:|   |.:|..|:..|:..||..|:...||....|..:|.
  Fly    61 CSPQHVHQQHVSSDENLPSQPNHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQ 125

Zfish   222 SLGMTESQVKVWFQNRRTKWRK--------RHAAEMASAKKKQDSE---TERLKGASENEDDDDD 275
            .|.:.|.|||:||||||.|::|        :..|::|..:.:|.:.   .:||...|::..:...
  Fly   126 RLSLCERQVKIWFQNRRMKFKKDIQGHREPKSNAKLAQPQAEQSAHRGIVKRLMSYSQDPREGTA 190

Zfish   276 YNK--------PLDPNSDDEKITQLLKKHKPNSAL 302
            ..:        |::|..|.:...::..:...|:.:
  Fly   191 AAEKRPMMAVAPVNPKPDYQASQKMKTEASTNNGM 225

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nkx6.1	NP_001002475.1	Homeodomain	185..243	CDD:459649	24/60 (40%)
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	23/55 (42%)