DRSC/TRiP Functional Genomics Resources

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Protein Alignment nkx6.1 and zen2

DIOPT Version :10

Sequence 1:NP_001002475.1 Gene:nkx6.1 / 436748 ZFINID:ZDB-GENE-040718-178 Length:312 Species:Danio rerio
Sequence 2:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster


Alignment Length:115 Identity:37/115 - (32%)
Similarity:56/115 - (48%) Gaps:14/115 - (12%)


- Green bases have known domain annotations that are detailed below.


Zfish   185 KRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 249
            |.|.:|..||..|:..||:.|...||||...|..::..|.:||.|||:||||||.|.:|     .
  Fly    42 KSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKK-----S 101

Zfish   250 ASAKKKQDSETERLKGASENEDDDDDYNKPLDPNSDDEKITQLLKKHKPN 299
            .:.|....:.|..:..:|::.:         |...||:.:.:||:....|
  Fly   102 TNRKGAIGALTTSIPLSSQSSE---------DLQKDDQIVERLLRYANTN 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nkx6.1NP_001002475.1 Homeodomain 185..243 CDD:459649 27/57 (47%)
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 26/55 (47%)

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