DRSC/TRiP Functional Genomics Resources

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Protein Alignment nkx6.1 and CG34031

DIOPT Version :10

Sequence 1:NP_001002475.1 Gene:nkx6.1 / 436748 ZFINID:ZDB-GENE-040718-178 Length:312 Species:Danio rerio
Sequence 2:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster


Alignment Length:124 Identity:46/124 - (37%)
Similarity:59/124 - (47%) Gaps:12/124 - (9%)


- Green bases have known domain annotations that are detailed below.


Zfish   143 PLTEL------PGRTPIFWPGVMQSPH-WRDARFACSPHQNSVLLDKDGKRKH-----TRPTFSG 195
            |||..      |.|.||.:.|...|.. ||......|...||..|.:...||.     .|..:|.
  Fly    78 PLTNFDLCQGHPRRLPITFDGSTVSRFVWRTESILPSYITNSTNLQEKQLRKRFTDRKPRQAYSA 142

Zfish   196 QQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAKK 254
            .|:..||..|...|||:..:|..|:.||.:||.|||.|||||||||:|:..:.:..|.:
  Fly   143 SQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQLTSRLKIAHR 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nkx6.1NP_001002475.1 Homeodomain 185..243 CDD:459649 29/62 (47%)
CG34031NP_001246894.1 Homeodomain 134..190 CDD:459649 27/55 (49%)

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