Protein Alignment nkx6.1 and bsh

DIOPT Version :10

• Sequence 1: NP_001002475.1
• Gene: nkx6.1 / 436748
• ZFINID: ZDB-GENE-040718-178
• Length: 312
• Species: Danio rerio
• Sequence 2: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Alignment Length: 341
• Identity: 90/341 - (26%)
• Similarity: 125/341 - (36%)
• Gaps: 104/341 - (30%)

Zfish    10 SRQSAFLLNTPPLAALHSMTEMKTPLYPAYPLSSTGPAS-STSPTATSPNPGGIPVSSPGIKTSS 73
            |.:|||         .|.....|.|...::|..|..||| |.|.|||:.:.          :.:|
  Fly    87 SARSAF---------AHDNNPHKHPSQHSHPPQSHPPASASASATATARSN----------QAAS 132

Zfish    74 GL----------SALASAQQCAIATPHGINDILSRP--SVACSPAGILSGLPRFSSLSPPPPPGL 126
            |.          |...|.......|.|...|.:|:.  |.|.....:.:..|:     |||||.|
  Fly   133 GYAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQHPPVPTTQPQ-----PPPPPPL 192

Zfish   127 ----------------------------YFSPSAAAV-AVARYPKPLTELPGRTPIFW-PGVMQS 161
                                        |.|||:... :|..|......|.|..|.|. ||
  Fly   193 NGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPG---- 253

Zfish   162 PHWRDARFACSPH--------QNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERAR 218
                     |.|.        .|::   :..:|:..|..||..|:..|||.||..:||:.|||..
  Fly   254 ---------CVPELALGLGMGVNAL---RHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVE 306

Zfish   219 LAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAKKKQD---SETERLKGASENEDDDDDYNK-- 278
            ||.:||::|:|||.||||||.| .|:......:|.:..|   ||..:..|.:.:...|..:.|
  Fly   307 LATALGLSETQVKTWFQNRRMK-HKKQLRRRDNANEPVDFSRSEPGKQPGEATSSSGDSKHGKLN 370

Zfish   279 -------PLDPNSDDE 287
                   |..|.|:.:
  Fly   371 PGSVGGTPTQPTSEQQ 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nkx6.1	NP_001002475.1	Homeodomain	185..243	CDD:459649	30/57 (53%)
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	29/56 (52%)