DRSC/TRiP Functional Genomics Resources

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Protein Alignment dco and YCK3

DIOPT Version :9

Sequence 1:NP_001263132.1 Gene:dco / 43673 FlyBaseID:FBgn0002413 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_011049.2 Gene:YCK3 / 856860 SGDID:S000000925 Length:524 Species:Saccharomyces cerevisiae


Alignment Length:474 Identity:176/474 - (37%)
Similarity:244/474 - (51%) Gaps:89/474 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VGNKYRLGRKIGSGSFGDIYLGTTI------NTG-----------EEVAIKLECIRTKHPQLHIE 52
            ||..|.:|.|||.||||.|:.|..|      .||           |.||||.|...:..|||..|
Yeast    10 VGIHYAVGPKIGEGSFGVIFEGENILHSCQAQTGSKRDSSIIMANEPVAIKFEPRHSDAPQLRDE 74

  Fly    53 SKFYKTMQGGIGIPRIIWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQMISRID 117
            .:.|:.:.|.:|||...:.|.||.:|:::::||||||||||.:|.|:||:||..::|.|||.|:.
Yeast    75 FRAYRILNGCVGIPHAYYFGQEGMHNILIIDLLGPSLEDLFEWCGRKFSVKTTCMVAKQMIDRVR 139

  Fly   118 YIHSRDFIHRDIKPDNFLMG----LGKKG--------------NLVYIIDFGLAKKFRDARSLKH 164
            .||..|.|:|||||||||:.    :..:|              ||:|::|||:||::||.|:.:|
Yeast   140 AIHDHDLIYRDIKPDNFLISQYQRISPEGKVIKSCASSSNNDPNLIYMVDFGMAKQYRDPRTKQH 204

  Fly   165 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGALPWQGLKAANKRQKYERI- 228
            |||||.|:|:|||||.|||||.|.||||||||||||:|..||..|:||||||||.|.:.|||:| 
Yeast   205 IPYRERKSLSGTARYMSINTHFGREQSRRDDLESLGHVFFYFLRGSLPWQGLKAPNNKLKYEKIG 269

  Fly   229 -SEKKLSTSIVVLCKGFPSEFVNYLNFCRQMHFDQRPDYCHLRKLFRNLFHRLGFTYDYVFDW-- 290
             :::||:...::|....|.:|..||.:.|.:.||:.|||.:|..|..:.........|..:||  
Yeast   270 MTKQKLNPDDLLLNNAIPYQFATYLKYARSLKFDEDPDYDYLISLMDDALRLNDLKDDGHYDWMD 334

  Fly   291 ---------------NLLKFGGPRNPQAIQQAQDGADGQAGHDAVAAAAAVA-AAAAASSHQQQQ 339
                           ||..:|.| ||:        .:|....:.|...:... ....|:..||.|
Yeast   335 LNGGKGWNIKINRRANLHGYGNP-NPR--------VNGNTARNNVNTNSKTRNTTPVATPKQQAQ 390

  Fly   340 HKVN-----AALGGGGGSAAQQQLQGGQTLAMLGGNGGGNGSQLIGGNGLNMD----------DS 389
            :..|     :.:.....|..:||    ..|..:..|     |:.|.....|:.          ||
Yeast   391 NSYNKDNSKSRISSNPQSFTKQQ----HVLKKIEPN-----SKYIPETHSNLQRPIKSQSQTYDS 446

  Fly   390 MAAT-NSSRPPYDTPERRP 407
            ::.| ||...||.:.:..|
Yeast   447 ISHTQNSPFVPYSSSKANP 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcoNP_001263132.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 142/310 (46%)
YCK3NP_011049.2 PKc_like 13..320 CDD:419665 142/306 (46%)
ROM1 361..>479 CDD:227709 23/114 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344352
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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