DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dco and ckl8

DIOPT Version :9

Sequence 1:NP_001263132.1 Gene:dco / 43673 FlyBaseID:FBgn0002413 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_199146.1 Gene:ckl8 / 834350 AraportID:AT5G43320 Length:480 Species:Arabidopsis thaliana


Alignment Length:420 Identity:217/420 - (51%)
Similarity:284/420 - (67%) Gaps:46/420 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MELRVGNKYRLGRKIGSGSFGDIYLGTTINTGEEVAIKLECIRTKHPQLHIESKFYKTMQGGIGI 65
            |:..||.||:||||:||||||:::||..:.||||||:|||..|.:|||||.|||.|..:|||.||
plant     1 MDRVVGGKYKLGRKLGSGSFGELFLGVNVQTGEEVAVKLEPARARHPQLHYESKLYMLLQGGTGI 65

  Fly    66 PRIIWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQMISRIDYIHSRDFIHRDIK 130
            |.:.|.|.||:||.||::|||||:|||||:|||||:|||||:||||||:|::|:|.|.|:|||||
plant    66 PHLKWYGVEGEYNCMVIDLLGPSMEDLFNYCSRRFNLKTVLMLADQMINRVEYMHVRGFLHRDIK 130

  Fly   131 PDNFLMGLGKKGNLVYIIDFGLAKKFRDARSLKHIPYRENKNLTGTARYASINTHLGIEQSRRDD 195
            |||||||||:|.|.|||||:|||||:||.::.:||||||||||||||||||:|||||||||||||
plant   131 PDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDD 195

  Fly   196 LESLGYVLMYFNLGALPWQGLKAANKRQKYERISEKKLSTSIVVLCKGFPSEFVNYLNFCRQMHF 260
            |||||||||||..|:||||||:|..|:|||::|||||..|.:.||||.||.||.:|..:.|.:.|
plant   196 LESLGYVLMYFLRGSLPWQGLRAGTKKQKYDKISEKKRLTPVEVLCKSFPPEFTSYFLYVRSLRF 260

  Fly   261 DQRPDYCHLRKLFRNLFHRLGFTYDYVFDWNLLKFGGPRNPQAIQQAQDGADGQAGHDAVAAAAA 325
            :.:|||.:|::|||:||.|.|:.:||||||.:||:     ||                       
plant   261 EDKPDYPYLKRLFRDLFIREGYQFDYVFDWTILKY-----PQ----------------------- 297

  Fly   326 VAAAAAASSHQQQQHKVNAAL-------------GGGGGSAAQQQLQGGQTLAMLGGNGGGNGSQ 377
              .::.:||..:.:..:..|:             ..|.|..::.:..|... |....||.|:|..
plant   298 --FSSGSSSSSKPRSSLRPAMNPPVPIAERPDKPSAGAGQDSRDRFSGALE-AYARRNGSGSGVV 359

  Fly   378 LIGGNGLNMDDSMAATNSSRPP--YDTPER 405
            ....:.....:::.|::....|  |:..||
plant   360 QADRSRPRTSENVLASSKDTTPQNYERVER 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcoNP_001263132.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 187/273 (68%)
ckl8NP_199146.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 187/273 (68%)
Pkinase 9..244 CDD:278497 169/234 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 352 1.000 Domainoid score I215
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 462 1.000 Inparanoid score I362
OMA 1 1.010 - - QHG54222
OrthoDB 1 1.010 - - D1097975at2759
OrthoFinder 1 1.000 - - FOG0000297
OrthoInspector 1 1.000 - - otm2420
orthoMCL 1 0.900 - - OOG6_100396
Panther 1 1.100 - - O PTHR11909
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X224
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.880

Return to query results.
Submit another query.