DRSC/TRiP Functional Genomics Resources

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Protein Alignment dco and VRK2

DIOPT Version :9

Sequence 1:NP_001263132.1 Gene:dco / 43673 FlyBaseID:FBgn0002413 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001123952.1 Gene:VRK2 / 7444 HGNCID:12719 Length:508 Species:Homo sapiens


Alignment Length:392 Identity:119/392 - (30%)
Similarity:184/392 - (46%) Gaps:51/392 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GNKYRLGRKIGSGSFGDIYLGTTINTGEEVA---IKLECIRTKHPQLHIESKFYKTMQ------- 60
            ||::.||:|||||.||.|||....|..|:.|   :|:|  ..::..|..|.|||:.:.       
Human    26 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVE--YQENGPLFSELKFYQRVAKKDCIKK 88

  Fly    61 -------GGIGIPRIIWCGS-----EG-DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQM 112
                   ..:|||  ::.||     :| .|..||||.||..|:.: :..:..|...|||.|..:|
Human    89 WIERKQLDYLGIP--LFYGSGLTEFKGRSYRFMVMERLGIDLQKI-SGQNGTFKKSTVLQLGIRM 150

  Fly   113 ISRIDYIHSRDFIHRDIKPDNFLMGLGKKGNLVYIIDFGLAKKFRDARSLKHIPYREN--KNLTG 175
            :..::|||..:::|.|||..|.|:|. |..:.||:.|:||:  :|...:..|..|:||  |...|
Human   151 LDVLEYIHENEYVHGDIKAANLLLGY-KNPDQVYLADYGLS--YRYCPNGNHKQYQENPRKGHNG 212

  Fly   176 TARYASINTHLGIEQSRRDDLESLGYVLMYFNLGALPW-QGLK--AANKRQKYERISEKKLSTSI 237
            |..:.|::.|.|:..|||.|:|.|||.::.:..|.||| |.||  .|.:..|...:.|  |..|:
Human   213 TIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDE--LPQSV 275

  Fly   238 VVLCKGFPS-----EFVNYLNFCRQMHFDQRPDYCHLRKLFRNLFHRLGFTYDYVFDWNLLKFGG 297
            :   |..||     |...:|.....:.:|::|:|..|:|:.......|| ..|:......:....
Human   276 L---KWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLG-PLDFSTKGQSINVHT 336

  Fly   298 PRNPQAIQQAQDGADGQA--GHDAVAAAAAVAAAAAASSHQQQQHKVNAALGGGGGSAAQQQLQG 360
            | |.|.: .:|..|..|.  .|:.:......:..:|.|....:..|....:|.....|||:..:.
Human   337 P-NSQKV-DSQKAATKQVNKAHNRLIEKKVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRR 399

  Fly   361 GQ 362
            .|
Human   400 RQ 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcoNP_001263132.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 100/306 (33%)
VRK2NP_001123952.1 STKc_VRK2 16..314 CDD:271025 101/300 (34%)
SPS1 29..421 CDD:223589 117/389 (30%)
Interaction with MAP3K7. /evidence=ECO:0000269|PubMed:17709393 397..508 1/5 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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