DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dco and Csnk1g3

DIOPT Version :9

Sequence 1:NP_001263132.1 Gene:dco / 43673 FlyBaseID:FBgn0002413 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_074046.1 Gene:Csnk1g3 / 64823 RGDID:621408 Length:448 Species:Rattus norvegicus


Alignment Length:413 Identity:192/413 - (46%)
Similarity:264/413 - (63%) Gaps:40/413 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LRVGNKYRLGRKIGSGSFGDIYLGTTINTGEEVAIKLECIRTKHPQLHIESKFYKTMQGGIGIPR 67
            |.||..:|:|:|||.|:||::.||..:.|.|.||||||.::::.||||:|.:|||.:..|.|||:
  Rat    37 LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ 101

  Fly    68 IIWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQMISRIDYIHSRDFIHRDIKPD 132
            :.:.|..|.||.||:|||||||||||:.|.|.|||||||::|.|:|||::|:||::.|:||:||:
  Rat   102 VYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPE 166

  Fly   133 NFLMGLGKKGN----LVYIIDFGLAKKFRDARSLKHIPYRENKNLTGTARYASINTHLGIEQSRR 193
            |||  :|:.||    :::||||||||::.|..:.|||||||:|:|||||||.|||||||.|||||
  Rat   167 NFL--IGRPGNKAQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRR 229

  Fly   194 DDLESLGYVLMYFNLGALPWQGLKAANKRQKYERISEKKLSTSIVVLCKGFPSEFVNYLNFCRQM 258
            ||||:||::.|||..|:||||||||...:::|::|.:.|.:|.|.|||:.||.|...||.:.|::
  Rat   230 DDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRRL 294

  Fly   259 HFDQRPDYCHLRKLFRNLFHRLGFTYDYVFDWNLLKFGGPRNPQ---AIQQAQDGADGQAGH--- 317
            .|.::|||.:|||||.:||.|.|:.:||.:||.     |.:.|.   |:||....:..:..|   
  Rat   295 DFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWI-----GKQLPTPVGAVQQDPALSSNREAHQHR 354

  Fly   318 DAVAAAAAVAA--AAAASSHQQQQHKVNAALGGGGGSAAQQQLQGGQTLAMLGGNGGGNGSQLIG 380
            |.:..:...:|  .||..|.|...|.:.|.|      ||.:  .||....:...||         
  Rat   355 DKIQQSKNQSADHRAAWDSQQANPHHLRAHL------AADR--HGGSVQVVSSTNG--------- 402

  Fly   381 GNGLNMDDSMAATNSSRPPYDTP 403
              .||.||..|  ..|..|...|
  Rat   403 --ELNTDDPTA--GRSNAPITAP 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcoNP_001263132.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 155/277 (56%)
Csnk1g3NP_074046.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35
STKc_CK1_gamma 42..329 CDD:271028 160/293 (55%)
CK1gamma_C 329..418 CDD:403712 26/109 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..375 6/32 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 392..417 9/37 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.