DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dco and ttbk2b

DIOPT Version :9

Sequence 1:NP_001263132.1 Gene:dco / 43673 FlyBaseID:FBgn0002413 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001313220.1 Gene:ttbk2b / 569881 ZFINID:ZDB-GENE-030131-8246 Length:928 Species:Danio rerio


Alignment Length:374 Identity:121/374 - (32%)
Similarity:170/374 - (45%) Gaps:42/374 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LRVGN----KYRLGRKIGSGSFGDIYLGTTINTGEEVAIKLECIRTKHPQLHIESKFYKTMQGGI 63
            |.||:    ::|:.:|||.|.||:||..........||:|:|..:.....|.:|....|.:||..
Zfish    11 LAVGSMVRERWRVLKKIGGGGFGEIYEVLDHVNQVSVALKVESAQQPKQVLKMEVAVLKRLQGKD 75

  Fly    64 GIPRIIWCGSEGDYNVMVMELLGPSLEDL-FNFCSRRFSLKTVLLLADQMISRIDYIHSRDFIHR 127
            .:.|.:.||....:|.:||||.|.:|.|| .|.....||:.|.|.|..|::..|:.|||..|:||
Zfish    76 HVCRFVGCGRNDRFNYVVMELQGRNLADLRRNMSHGTFSVSTTLRLGRQILEAIESIHSVGFLHR 140

  Fly   128 DIKPDNFLMG-LGKKGNLVYIIDFGLAKKFRDARSLKHI-PYRENKNLTGTARYASINTHLGIEQ 190
            ||||.||.|| |.......|::|||||::|  ..|.:.: |.|......||.||||||.|...|.
Zfish   141 DIKPSNFAMGRLNSTCRTCYMLDFGLARQF--TNSCQEVRPPRPVAGFRGTVRYASINAHKNKEM 203

  Fly   191 SRRDDLESLGYVLMYFNLGALPWQGLKAANKRQKYERISEKKLSTSIVVLCKGFPSEFVNYLNFC 255
            .|.|||.||.|:|:.|.:|.|||:.:|      ..|::...|.:.:..:|.|..|.||..:.:..
Zfish   204 GRHDDLWSLFYMLVEFMVGQLPWRKIK------DKEQVGNMKETYNHRLLLKHLPDEFSVFFDHI 262

  Fly   256 RQMHFDQRPDYCHLRKLFRNLFHRLGFTYDYVFDWNLLKFGGPRNPQAIQQAQDGADGQAGHDAV 320
            ..:.:..:|||..|..:|.|.........:..:||..|               |..|        
Zfish   263 SNLDYYTKPDYQLLMSVFDNSMKSYNVVENDPYDWEKL---------------DSED-------- 304

  Fly   321 AAAAAVAAAAAASSHQQQQHKVNAALGGGGGSAAQQQLQGGQTLAMLGG 369
                .:.....|::.||......|.||....||....||...|..:|.|
Zfish   305 ----TLNVGTLATTAQQLTRLTPAYLGMANASAIPGDLQRENTEDVLQG 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcoNP_001263132.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 100/276 (36%)
ttbk2bNP_001313220.1 STKc_TTBK 20..281 CDD:270919 98/268 (37%)
SPS1 21..361 CDD:223589 118/364 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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