DRSC/TRiP Functional Genomics Resources

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Protein Alignment dco and vrk3

DIOPT Version :10

Sequence 1:NP_524602.1 Gene:dco / 43673 FlyBaseID:FBgn0002413 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001013586.2 Gene:vrk3 / 541443 ZFINID:ZDB-GENE-030131-246 Length:512 Species:Danio rerio


Alignment Length:226 Identity:61/226 - (26%)
Similarity:105/226 - (46%) Gaps:12/226 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 IGIPRIIWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQMISRIDYIHSRDFIHR 127
            :|||..:..|....|..:|...:|..|:...:..:...|.|.||.||.:::..:::||.:::.|.
Zfish   288 LGIPSCVGFGLHETYRFLVFPCMGQPLQTELDEGTGSLSEKNVLQLALRLLDSLEFIHEKEYAHA 352

  Fly   128 DIKPDNFLMGLGKKGNLVYIIDFGLAKKFRDARSLKHIPYRENKNLT--GTARYASINTHLGIEQ 190
            ||...|..: .......|::..||.|  ||.....||:.||:.....  |...:.|:::|.|...
Zfish   353 DIHAGNIYI-KSSSHTEVFLSGFGHA--FRFCPGGKHVEYRQGSRTAHQGNISFISLDSHKGAGP 414

  Fly   191 SRRDDLESLGYVLMYFNLGALPWQGLKAANKRQKYERISEKKLS--TSIVVLC---KGFPSEFVN 250
            |||.||:||||.::.:..|:|||..|...:.....|:  |:.:|  ..::..|   |...|....
Zfish   415 SRRSDLQSLGYCMLCWMTGSLPWSHLSHNSSSVAAEK--ERYMSDVPGLLTYCYKQKKASSALQE 477

  Fly   251 YLNFCRQMHFDQRPDYCHLRKLFRNLFHRLG 281
            ||.....:.:.::|||..|:...:....::|
Zfish   478 YLCNVMALQYTEKPDYTLLKGGLQQSLQKMG 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcoNP_524602.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 61/226 (27%)
vrk3NP_001013586.2 DZR 5..>28 CDD:432773
PK_VRK3 207..504 CDD:271026 60/220 (27%)
Blue background indicates that the domain is not in the aligned region.

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