DRSC/TRiP Functional Genomics Resources

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Protein Alignment dco and gish

DIOPT Version :9

Sequence 1:NP_001263132.1 Gene:dco / 43673 FlyBaseID:FBgn0002413 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster


Alignment Length:413 Identity:188/413 - (45%)
Similarity:257/413 - (62%) Gaps:35/413 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LRVGNKYRLGRKIGSGSFGDIYLGTTINTGEEVAIKLECIRTKHPQLHIESKFYKTM-----QGG 62
            |.||..:|:|:|||.|:||::.||..:...|.||||:|.:::|.||||:|.:|||.:     ...
  Fly    56 LMVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAP 120

  Fly    63 IGIPRIIWCGS-EGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQMISRIDYIHSRDFIH 126
            .|||||...|: .|.||.||:||||.|||||||.|:|:|||||||::|.|::.||:|:|||..|:
  Fly   121 DGIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIY 185

  Fly   127 RDIKPDNFLMG--LGKKGNLVYIIDFGLAKKFRDARSLKHIPYRENKNLTGTARYASINTHLGIE 189
            ||:||:|||:|  ..|:..:::||||||||::.|..:.:||||||:|:|||||||.|||||:|.|
  Fly   186 RDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGRE 250

  Fly   190 QSRRDDLESLGYVLMYFNLGALPWQGLKAANKRQKYERISEKKLSTSIVVLCKGFPSEFVNYLNF 254
            ||||||||:||::.|||..|:||||||||...:::|::|.:.|.:|.|.|||.|.|.||..||.:
  Fly   251 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRY 315

  Fly   255 CRQMHFDQRPDYCHLRKLFRNLFHRLGFTYDYVFDWNLLKFGGPRNPQAIQQAQDGADGQAGHDA 319
            .|::.|.:.|||..||:||::||.|.|:|.:..|||.......|....           |.||:.
  Fly   316 VRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWTGKTMSTPVGSL-----------QTGHEV 369

  Fly   320 VAAAAAVAAAAAASSHQQQQHKVNAALGGGGGSAAQQQL-QGGQTLAMLGGNGGGNGSQLIGG-N 382
            :.            |..:.:|.|.|.....||.||...: :.|.||..|.........|::.. |
  Fly   370 II------------SPNKDRHNVTAKTNAKGGVAAWPDVPKPGATLGNLTPADRHGSVQVVSSTN 422

  Fly   383 G-LNMDDSMAATNSSRPPYDTPE 404
            | ||.||..|. :|:.|....||
  Fly   423 GELNPDDPTAG-HSNTPITQQPE 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcoNP_001263132.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 152/281 (54%)
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 157/292 (54%)
S_TKc 62..335 CDD:214567 148/272 (54%)
CK1gamma_C 354..428 CDD:289378 21/96 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452692
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D46585at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11909
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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