DRSC/TRiP Functional Genomics Resources

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Protein Alignment dco and vrk2

DIOPT Version :10

Sequence 1:NP_524602.1 Gene:dco / 43673 FlyBaseID:FBgn0002413 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_957464.2 Gene:vrk2 / 394145 ZFINID:ZDB-GENE-040426-1046 Length:574 Species:Danio rerio


Alignment Length:289 Identity:93/289 - (32%)
Similarity:144/289 - (49%) Gaps:32/289 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YRLGRKIGSGSFGDIYLGT-----TINTGEEVAIKLECIRTKHPQLHIESKFY------KTMQ-- 60
            :|:|:.||.|.||.|||.:     .:....:..||:|  ..::..|..|.|||      :||.  
Zfish    26 WRIGKMIGKGGFGLIYLASQDVNVPVRDDADFVIKVE--YHENGPLFSELKFYQRAAKPETMSKW 88

  Fly    61 ------GGIGIPRIIWCG---SEGD-YNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQMISR 115
                  |.:|||.....|   |.|. |..|||:.||..|:.:......:....:||.|...|:..
Zfish    89 MKSKQLGFLGIPTYWGSGLTESNGTRYRFMVMDRLGTDLQKVLIDNGGQLRKTSVLQLGVLMLDV 153

  Fly   116 IDYIHSRDFIHRDIKPDNFLMGLGKKGNLVYIIDFGLAKKFRDARSLKHIPYREN--KNLTGTAR 178
            ::|||..:::|.|||..|.|:|. :..|.||:.|:||:  :|...:.:|..|:||  |...||..
Zfish   154 LEYIHDNEYVHADIKAANLLLGY-RDPNKVYLADYGLS--YRYCPNGEHKEYKENPKKGHNGTIE 215

  Fly   179 YASINTHLGIEQSRRDDLESLGYVLMYFNLGALPW-QGLKAANKRQKYERISEKKLSTSIVVLCK 242
            |.||:.|.|:..|||.||:.|||.|:::..|.||| ..||...:.|:.:......|..|::.:..
Zfish   216 YTSIDAHKGVAASRRGDLKVLGYCLLHWQCGTLPWLPSLKNPAEVQEAKAKLMSNLPDSVLKMST 280

  Fly   243 GFPS-EFVNYLNFCRQMHFDQRPDYCHLR 270
            ...| |...:|:..:.:.::::|||..||
Zfish   281 SSSSMEIAQFLSRVKDLGYNEKPDYQALR 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcoNP_524602.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 93/289 (32%)
vrk2NP_957464.2 STKc_VRK2 13..313 CDD:271025 93/289 (32%)

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