DRSC/TRiP Functional Genomics Resources

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Protein Alignment dco and Vrk1

DIOPT Version :10

Sequence 1:NP_524602.1 Gene:dco / 43673 FlyBaseID:FBgn0002413 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001012194.1 Gene:Vrk1 / 362779 RGDID:1306069 Length:414 Species:Rattus norvegicus


Alignment Length:336 Identity:100/336 - (29%)
Similarity:162/336 - (48%) Gaps:41/336 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KYRLGRKIGSGSFGDIYLGTTINTGEEVAIKLECIRTKHPQ----LHIESKFY------KTMQGG 62
            :::||..||.|.||.|||..| |:.:.|.....|:....|.    |..|.|||      :.:|..
  Rat    36 EWKLGLPIGQGGFGCIYLADT-NSSKPVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKW 99

  Fly    63 I--------GIPRIIWCGSEGD-----YNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQMIS 114
            |        |:|: .|.....|     |..|:|:..|..|:.::...::|||.||||.|:.:::.
  Rat   100 IHTHKLKYLGVPK-YWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILD 163

  Fly   115 RIDYIHSRDFIHRDIKPDNFLMGLGKKGNLVYIIDFGLAKKFRDARSLKHIPYRENKNL--TGTA 177
            .::|||..:::|.|||..|.|:.. |..:.||::|:|||  :|......|..|:|:...  .||.
  Rat   164 ILEYIHEHEYVHGDIKASNLLLSY-KNPDQVYLVDYGLA--YRYCPDGVHKEYKEDPKRCHDGTL 225

  Fly   178 RYASINTHLGIEQSRRDDLESLGYVLMYFNLGALPWQ-GLKAANKRQKYERISEKKLSTSIVVL- 240
            .:.||:.|.|:..|||.|||.|||.::.:..|.|||: .||..|    |.|.|:.:...::..| 
  Rat   226 EFTSIDAHNGVAPSRRGDLEILGYCMIQWLSGCLPWEDNLKDPN----YVRQSKIRYRDNVAALM 286

  Fly   241 --C---KGFPSEFVNYLNFCRQMHFDQRPDYCHLRKLFRNLFHRLGFTYDYVFDWNLLKFGGPRN 300
              |   :..|.|...|:...:.:.:.::|.|.:||.:.......:|...|...|::.::.|....
  Rat   287 EKCFPERNKPGEIAKYMETVKLLDYTEKPLYQNLRDILLQGLKAIGSKDDGKLDFSAVENGSVNT 351

  Fly   301 PQAIQQAQDGA 311
            ..|.::.:.||
  Rat   352 KPASKKRKKGA 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcoNP_524602.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 93/305 (30%)
Vrk1NP_001012194.1 STKc_VRK1 26..326 CDD:271024 93/298 (31%)

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