DRSC/TRiP Functional Genomics Resources

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Protein Alignment dco and Vrk3

DIOPT Version :10

Sequence 1:NP_524602.1 Gene:dco / 43673 FlyBaseID:FBgn0002413 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001005561.2 Gene:Vrk3 / 361565 RGDID:1549692 Length:462 Species:Rattus norvegicus


Alignment Length:271 Identity:67/271 - (24%)
Similarity:129/271 - (47%) Gaps:41/271 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 AIKLECIRTKHPQLHIESKFY----KTMQGG----------IGIPRIIWCGSEGD-YNVMVMELL 85
            ::||:   :|..:|..|..|:    |.:|..          :.||..|..|...| |..:|...|
  Rat   189 SLKLD---SKDGRLFNEQNFFQRAAKPLQVNKWKKRCLTPLLAIPTCIGFGVHQDKYRFLVFPSL 250

  Fly    86 GPSLEDLFNFCSRR-FSLKTVLLLADQMISRIDYIHSRDFIHRDIKPDNFLMGLGKKGNLVYIID 149
            |.||:...:...:. .|.:.:|.:|.:::..::|:|..:::|.::..:|..:. .:..:.|.::.
  Rat   251 GRSLQSALDDNPKHVVSERCMLQVACRLLDALEYLHEHEYVHGNLTTENVFVN-PEDLSQVTLVG 314

  Fly   150 FGLAKKFRDARSLKHIPYRE-NKNL-TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGALP 212
            :|..  :|.....||:.|:| :::| .|...:.|::.|.|...|||.||::|||.::.:..|:||
  Rat   315 YGFT--YRYCPGGKHVAYKEGSRSLHDGDLEFISMDVHKGCGPSRRSDLQTLGYCMLKWLYGSLP 377

  Fly   213 WQGL-----KAANKRQKYERISEKKLSTSIVVLCKGF--PSEFV-NYLNFCRQMHFDQRPDYCHL 269
            |...     :...::|||:...|     .:|.||..:  .||.: .||.....:.::::|.|..|
  Rat   378 WTNCLPNTEEITKQKQKYQDNPE-----PLVGLCGRWNKTSETLREYLKVVMALDYEEKPPYATL 437

  Fly   270 RK----LFRNL 276
            |.    |.:|:
  Rat   438 RNNLEVLLQNM 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcoNP_524602.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 67/271 (25%)
Vrk3NP_001005561.2 zinc_ribbon_2 13..32 CDD:433054
Protein Kinases, catalytic domain 143..445 CDD:473864 65/266 (24%)
Blue background indicates that the domain is not in the aligned region.

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