DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dco and ttbk-4

DIOPT Version :10

Sequence 1:NP_524602.1 Gene:dco / 43673 FlyBaseID:FBgn0002413 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_501824.1 Gene:ttbk-4 / 177871 WormBaseID:WBGene00012169 Length:366 Species:Caenorhabditis elegans


Alignment Length:324 Identity:100/324 - (30%)
Similarity:144/324 - (44%) Gaps:65/324 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GNKY---RLGRKIGSGSFGDIYLGTTINTGEEV--------------AIKLEC-----IRTKHPQ 48
            |.|:   ::|:.|..|.||.:|:.|:|:..::|              |||||.     :....|.
 Worm    18 GKKFGDWKIGKTIDEGGFGKVYIATSISDPKKVAALKAESNEIEGGSAIKLEAMILNKLNANGPV 82

  Fly    49 LHIESKFYKTMQGGIGIPRIIWCGSEGDYNVMVMELLGPSLEDLFN---FCSRRFSLKTVLLLAD 110
            .|              ||.:..|.....|..|||.|||.:|..|.:   ..:..||..|...:..
 Worm    83 PH--------------IPVVHLCAKRKLYCYMVMTLLGRNLRKLKSTNLVVNNGFSRGTWSRIGI 133

  Fly   111 QMISRIDYIHSRDFIHRDIKPDNFLMGL---GKKGNLVYIIDFGLAKKFRDARSLKHIPYRENK- 171
            |.:..:.|:|...|||||:||.|||:|.   .::..:|:|:|||||:.|    ::.|.  |||| 
 Worm   134 QCLYALKYVHDNGFIHRDVKPQNFLLGNETDSERARIVHILDFGLARPF----AVFHA--RENKW 192

  Fly   172 ---------NLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG-ALPWQGLKAANKRQKYE 226
                     ...||.||.|.|.||..||.|.||:.||.||::..|.| |||||      ...:.|
 Worm   193 IARRARGTAEFRGTLRYTSPNVHLRKEQGRVDDVWSLLYVIIELNGGKALPWQ------TDSQRE 251

  Fly   227 RISEKKLSTSIVVLCKGFPSEFVNYLNFCRQMHFDQRPDYCHLRKLFRNLFHRLGFTYDYVFDW 290
            |:.:.||:....|:....|:.....:.....:.:.|||||..:.|.|..:......|....:||
 Worm   252 RVEQMKLNLPAKVVMSNMPACMDKVMPHLASLDYYQRPDYHMIFKCFWQVMENEKITPSSKYDW 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcoNP_524602.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 96/312 (31%)
ttbk-4NP_501824.1 Protein Kinases, catalytic domain 24..298 CDD:473864 94/299 (31%)

Return to query results.
Submit another query.