DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dco and kin-19

DIOPT Version :9

Sequence 1:NP_001263132.1 Gene:dco / 43673 FlyBaseID:FBgn0002413 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001369852.1 Gene:kin-19 / 175524 WormBaseID:WBGene00002202 Length:341 Species:Caenorhabditis elegans


Alignment Length:346 Identity:215/346 - (62%)
Similarity:261/346 - (75%) Gaps:20/346 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VGNKYRLGRKIGSGSFGDIYLGTTINTGEEVAIKLECIRTKHPQLHIESKFYKTMQGGIGIPRII 69
            |..||:|.||||||||||||:...:..|||||||||..|.:||||..|||.|:.:|||:|||.|.
 Worm    12 VATKYKLIRKIGSGSFGDIYVSINVTNGEEVAIKLESNRARHPQLLYESKVYRILQGGVGIPHIR 76

  Fly    70 WCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQMISRIDYIHSRDFIHRDIKPDNF 134
            |.|:|.:|||:||:|||||||||||||||||::||||:||||||.||:|:|.::|||||||||||
 Worm    77 WYGTEREYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMIGRIEYVHVKNFIHRDIKPDNF 141

  Fly   135 LMGLGKKGNLVYIIDFGLAKKFRDARSLKHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESL 199
            |||:|:..|.:::||||||||:||:|:..||||||:|||||||||||||.|||||||||||:|||
 Worm   142 LMGIGRHCNKLFLIDFGLAKKYRDSRTRTHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESL 206

  Fly   200 GYVLMYFNLGALPWQGLKAANKRQKYERISEKKLSTSIVVLCKGFPSEFVNYLNFCRQMHFDQRP 264
            ||||||||.|.|||||||||.|:||||:|||||::||:..||||||:||..||::.|.:.||:.|
 Worm   207 GYVLMYFNRGTLPWQGLKAATKKQKYEKISEKKMTTSVEHLCKGFPAEFPMYLSYTRGLRFDESP 271

  Fly   265 DYCHLRKLFRNLFHRLGFTYDYVFDWNLLKFGGPRNPQAIQQAQDGADGQAGHDAVAAAAAVAAA 329
            ||.:||:|||.||..|...|||.|||.:||       |..||:|  :.|..|.:.....|.|.:|
 Worm   272 DYMYLRQLFRILFRTLNHQYDYTFDWTMLK-------QKAQQSQ--SSGVPGTNTTTQGATVPSA 327

  Fly   330 AAASSHQQQQHKVNAALGGGG 350
            .           |.|.:..||
 Worm   328 G-----------VPAGVAPGG 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcoNP_001263132.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 193/273 (71%)
kin-19NP_001369852.1 STKc_CK1_alpha 15..280 CDD:271030 187/264 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54222
OrthoDB 1 1.010 - - D1097975at2759
OrthoFinder 1 1.000 - - FOG0000297
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100396
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3408
SonicParanoid 1 1.000 - - X224
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.760

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