DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dco and ttbk1b

DIOPT Version :9

Sequence 1:NP_001263132.1 Gene:dco / 43673 FlyBaseID:FBgn0002413 Length:440 Species:Drosophila melanogaster
Sequence 2:XP_017207296.1 Gene:ttbk1b / 100000353 ZFINID:ZDB-GENE-100609-5 Length:1219 Species:Danio rerio


Alignment Length:484 Identity:138/484 - (28%)
Similarity:204/484 - (42%) Gaps:95/484 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VGNKYRLGRKIGSGSFGDIYLGTTINTGEEVAIKLECIRTKHPQLHIESKFYKTMQGGIGIPRII 69
            |.:::::.:|||.|.||:||....:.|.|.||:|:|..:.....|.:|....|.:||...:.:.|
Zfish    30 VKDRWKVLKKIGGGGFGEIYEAYDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKNHVCKFI 94

  Fly    70 WCGSEGDYNVMVMELLGPSLEDLFNFCSRR------FSLKTVLLLADQMISRIDYIHSRDFIHRD 128
            .||....:|.:||:|.|.:|.||     ||      ||:.|.|.|..|::..|:.|||..|:|||
Zfish    95 GCGRNDKFNYVVMQLQGRNLADL-----RRSQPRGTFSMSTTLRLGKQILESIEAIHSVGFLHRD 154

  Fly   129 IKPDNFLMG-LGKKGNLVYIIDFGLAKKFRDARSLKHIPYRENKNLTGTARYASINTHLGIEQSR 192
            |||.||.|| |.......|::|||||:::.:... :..|.|......||.||||||.|...|..|
Zfish   155 IKPSNFAMGRLPSTCRKCYMLDFGLARQYTNTNG-EVRPPRSVAGFRGTVRYASINAHKNKEMGR 218

  Fly   193 RDDLESLGYVLMYFNLGALPWQGLKAANK----RQKYERISEKKLSTSIVVLCKGFPSEFVNYLN 253
            .|||.||.|:|:.|.:|.|||:.:|...:    :::||.          .:|.|..|:||..:.:
Zfish   219 HDDLWSLFYMLVEFTVGQLPWRKIKDKEQVGQIKERYEH----------RMLLKHMPAEFHIFYD 273

  Fly   254 FCRQMHFDQRPDYCHLRKLFRNLFHRLGFTYDYVFDW---------------------------- 290
            ....:.:..:|||..|..:|.|.......|.:..:||                            
Zfish   274 HVLDLDYFTKPDYQLLMSVFENSMKDRVITENEPYDWEKSGTDTALPTSTHTPPQQNTRQTAAIV 338

  Fly   291 ---NLLKFGG--PR-NPQAIQQAQDGADGQAGHDAV--------AAAAAVAAAAAASSHQQQQHK 341
               |:....|  || |...:.|.:..:|.:....|:        |.||....|...:...:.|.:
Zfish   339 GVVNVTPVPGELPRENTDDVLQDEHLSDQENAPPALIPSRPSEPAPAAPAGEAWDETDFNRNQLR 403

  Fly   342 VNAALGGGGGSAAQQQLQGGQTLAMLGGNGGGNGSQLIGGNGLNMDDSMAATNSSRPPYDTPERR 406
            ::.       |..|...:.|...|    .||.:.|...||.|    |:.|     |||.......
Zfish   404 ISI-------SKTQVAAEDGDEPA----GGGRSVSPARGGEG----DAQA-----RPPRYRRVNS 448

  Fly   407 PSIRMRQGGGGGGGG------VGVGGMPS 429
            |......|....|.|      :.:.|.||
Zfish   449 PESERLSGAEDRGDGADKRSRLDMLGSPS 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dcoNP_001263132.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 99/284 (35%)
ttbk1bXP_017207296.1 STKc_TTBK1 33..294 CDD:271032 97/276 (35%)
SPS1 34..393 CDD:223589 114/374 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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