DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chchd3 and chchd6

DIOPT Version :10

Sequence 1:NP_651838.1 Gene:Chchd3 / 43672 FlyBaseID:FBgn0010808 Length:223 Species:Drosophila melanogaster
Sequence 2:XP_031757035.1 Gene:chchd6 / 548383 XenbaseID:XB-GENE-945702 Length:287 Species:Xenopus tropicalis


Alignment Length:296 Identity:59/296 - (19%)
Similarity:99/296 - (33%) Gaps:122/296 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGARQSQSREPRTVSMENPTPAGV---IDISDDVVKRLKAGISQQAREHAAAAEESKPVPKPTTK 62
            ||..:|..|:. :..|:......|   :.:||:||.|:|               :|....|..:.
 Frog     1 MGGSESTGRKV-SFGMDEEERVRVLRGVRLSDEVVNRMK---------------DSDLPSKDQST 49

  Fly    63 AAAKPAASSPAASP--APKVSSYPAAVPIYVQGGGHTISAADVQRQMNQELI-----KNDELWKE 120
            :||...||:|||.|  |...:|:||:..   .||.|..:||.|.:|..:|.:     :...:.:|
 Frog    50 SAASGTASAPAAFPSKAGPSASHPASTS---TGGAHKPTAAGVGQQYAEEDLYRRYEREQAIIQE 111

  Fly   121 RMAKL------------------------------------------------------------ 125
            .:|:|                                                            
 Frog   112 ELARLAKRERESAHEKLSASILREKNSTNQERRKAEHLCACVGSQRKKPGGRGSLACRYPEPVQF 176

  Fly   126 --------------EENLKKTNTI-------LEKE----YANAVENVHKRFVSTASSHKV----- 160
                          |..|::.||.       :||:    |....|..|.  .:|.:..:|     
 Frog   177 PADRGYQAKELEQKEAELQRLNTFYREQLSSIEKKNLEIYRLTAEQYHT--AATNAELRVRQRSY 239

  Fly   161 -PPCQDLKSQLLACYRAHPGETLKCIEEVAQFRQCI 195
             |.|.:|::.:|.||..:..|.|.|.....::|:|:
 Frog   240 DPVCMNLQADILKCYSENKQERLNCSNLAKEYRKCV 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chchd3NP_651838.1 DUF1690 <103..193 CDD:429752 26/185 (14%)
CHCH 163..195 CDD:429096 9/31 (29%)
chchd6XP_031757035.1 MIC19_MIC25 30..234 CDD:461615 41/223 (18%)

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