DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chchd3 and chchd6a

DIOPT Version :10

Sequence 1:NP_651838.1 Gene:Chchd3 / 43672 FlyBaseID:FBgn0010808 Length:223 Species:Drosophila melanogaster
Sequence 2:XP_005162368.1 Gene:chchd6a / 449542 ZFINID:ZDB-GENE-040930-2 Length:247 Species:Danio rerio


Alignment Length:207 Identity:47/207 - (22%)
Similarity:91/207 - (43%) Gaps:44/207 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QSREPRTVSMENP-TPAGVI--DISDDVVKRLK----------AGISQQAREHAAAAEESKPVPK 58
            |:|.|.|...:.| |.|...  |..:::.||.:          |.|:::.|| ||..:.|:.|.:
Zfish    57 QTRTPSTSDAQAPKTQAKTTFPDSKEELKKRYEQQQAIIQEELARIARKERE-AARQDISRAVQR 120

  Fly    59 PTTKAAAKPAASSPAASPAPKVSSYPAAVPIYVQGGGHTISAADVQRQMNQELIKNDELWKERMA 123
              .:|..:..:......||.::.::           |..:...:.      ||...:..::|::.
Zfish   121 --ERAQTRQESERAKQLPASELDAW-----------GKQLDKKEA------ELKALEAFYQEQIT 166

  Fly   124 KLEENLKKTNTILEKEYANAVENVHKRFVSTASSHKV----PPCQDLKSQLLACYRAHPGETLKC 184
            :||    |.|   |:.:..:.|..|.....:.::.|.    |.|.:|::|:|.|||.:..:||:|
Zfish   167 QLE----KKN---EERFRMSAEQFHAAATRSEANIKARNVEPVCLNLQAQILNCYRENREQTLQC 224

  Fly   185 IEEVAQFRQCID 196
            .:...::.|||:
Zfish   225 SDLAKEYMQCIN 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chchd3NP_651838.1 DUF1690 <103..193 CDD:429752 22/93 (24%)
CHCH 163..195 CDD:429096 11/31 (35%)
chchd6aXP_005162368.1 MIC19_MIC25 30..194 CDD:461615 32/163 (20%)
CHCH 203..237 CDD:429096 13/34 (38%)

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