DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alp4 and Alp1

DIOPT Version :9

Sequence 1:NP_524601.2 Gene:Alp4 / 43671 FlyBaseID:FBgn0016123 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_001262159.1 Gene:Alp1 / 40372 FlyBaseID:FBgn0283479 Length:530 Species:Drosophila melanogaster


Alignment Length:530 Identity:203/530 - (38%)
Similarity:285/530 - (53%) Gaps:53/530 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GPQ--FDVGKTKEPEDAEFWHNVGLRQLEKTIKQAQRVKEDSYQKKARNIIIFIGDGMGISTISA 102
            ||:  :|:....|.:..|||.:...|.|      ..::.....|.:|:|:|.|:||||.:.|::|
  Fly    24 GPEQSWDLDSISELKSKEFWFHDAQRTL------YNKLSTPPNQYRAKNVIFFLGDGMSVPTVTA 82

  Fly   103 GRIYKGQYLKHGYGEEETLVFDDFPNTGMAKTYNVDKQVPDSAGTATAIFSGSKTHYGAIGM--D 165
            |||:.|| |:...||...|.|:.|...|::|||.|:|||.|||.||:|..||.|.:|..||:  |
  Fly    83 GRIFDGQ-LRGVVGERNRLEFEKFNYVGLSKTYCVNKQVADSACTASAYLSGIKANYLTIGVTAD 146

  Fly   166 ATRSKKNGQ---QGRVQSVMEWAQKEGKRTGVVTTTRITHATPAATYAHIYDRDWECDTEVP--A 225
            ...:...|.   |.|:.|:..||.|..|..|:|||||:|||:||..|||..:||:|.|.:|.  .
  Fly   147 VELNDCRGSRLPQNRLSSIAAWALKGSKSAGLVTTTRVTHASPAGVYAHTSNRDFESDYDVTKLG 211

  Fly   226 ESVGFHVDIARQLVENAPGNRFNVILGGGMSPMGILNASEVKTTIFEGPTETICTRGDNRNLPAE 290
            ::.|...|||:||::...|.|..|::|||.    |.........:|....:    |.|||||..|
  Fly   212 QNPGNCPDIAQQLIDGDVGKRLRVVMGGGT----IKFLPNTTNDVFGNKGQ----RLDNRNLIEE 268

  Fly   291 WLAHHANDTVP--PALVHNRKDLLNVNVKKVDHLMGLFRNNHITYSIAREAGEPSLQEMTETALG 353
            |     ..|.|  ..:|.:|.||||.:.:..|.|:|||..:|:.|.:......|:|.|||..|:.
  Fly   269 W-----QQTKPGNARVVFSRTDLLNNDAQNTDFLLGLFNASHLAYHMDDSIDTPTLPEMTAAAIN 328

  Fly   354 ILERGDESNGFVLLVEGGRIDQGHHMNYARAALHELYEFDLAIQAAVNNTDPDETLILVTADHSH 418
            :|.|  :.||:.|.|||||||..||...|:.||.|..:|..|::.|...|:|.:|||:|:|||.|
  Fly   329 VLSR--DPNGYFLFVEGGRIDHAHHETKAKKALDETVQFSDAVRKARQLTNPWDTLIVVSADHGH 391

  Fly   419 AVTFNGYALRGADILGTANSHEKNDPMFYETISYANGPGYWDHLANDSRPQNSSN---MWMPLKH 480
            .||.:||......|:|..:.....|.:.|.:|||||||.|       .|...|::   ..:.|::
  Fly   392 TVTISGYPDVNNSIVGLNSELSNVDQLPYTSISYANGPAY-------ERFYKSTDGVVERVDLRN 449

  Fly   481 FTAEERAAPTYRHLATVPRKDETHGGEDVAVFAY-------GPGSSLIRGVFEQNYLAYVMSYAG 538
            ....:..| .|.|  .||..:|||||.||||:|:       ||.|.|..||:||:.|.::|.:|.
  Fly   450 LDFSKPDA-IYPH--GVPMTEETHGGGDVAVYAHVVEYLLQGPWSHLFTGVYEQSTLPHLMGFAS 511

  Fly   539 CLGPAKDFDD 548
            ||||...:.|
  Fly   512 CLGPGITYCD 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp4NP_524601.2 PhoA 60..534 CDD:224699 189/492 (38%)
alkPPc 85..541 CDD:214515 188/474 (40%)
Alp1NP_001262159.1 alkPPc 65..514 CDD:214515 188/474 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466682
Domainoid 1 1.000 141 1.000 Domainoid score I216
eggNOG 1 0.900 - - E1_COG1785
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I224
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - otm51319
orthoMCL 1 0.900 - - OOG6_100381
Panther 1 1.100 - - P PTHR11596
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X159
1110.800

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