DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alp4 and Alp12

DIOPT Version :9

Sequence 1:NP_524601.2 Gene:Alp4 / 43671 FlyBaseID:FBgn0016123 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_001188848.1 Gene:Alp12 / 35218 FlyBaseID:FBgn0032779 Length:596 Species:Drosophila melanogaster


Alignment Length:555 Identity:218/555 - (39%)
Similarity:316/555 - (56%) Gaps:53/555 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FLLGSLVAFSWAGVTTQPPPLIRTLSAGGDIGPQFDVG--KTKEPEDAEFWHNVGLRQLEKTI-K 70
            ||:.  |.||...:|......:......||:|....|.  ....|::.:.|::.|:.:|:|.: :
  Fly    64 FLIS--VVFSALLITAMCIGFVVHYGMSGDVGDMETVSYWPVDLPKEQKEWYDQGIDELQKAVSR 126

  Fly    71 QAQRVKEDSYQKKARNIIIFIGDGMGISTISAGRIYKGQYLKHGYGEEETLVFDDFPNTGMAKTY 135
            |..|       ::|:|:|:|:|||||.:|::|.||.       |..||..|.::.||:.|:.|||
  Fly   127 QFNR-------RRAKNVILFVGDGMGPNTVTAARIL-------GVKEEGLLRWEQFPDMGLLKTY 177

  Fly   136 NVDKQVPDSAGTATAIFSGSKTHYGAIGMDATRSKKN-----GQQGRVQSVMEWAQKEGKRTGVV 195
            ..|||||||..||||:|.|.|.:|...|:||.....|     .:...||::::|||.:|.|||.|
  Fly   178 CADKQVPDSFSTATALFGGVKVNYETGGVDANVPLGNCSASLKEDHHVQTILKWAQVDGMRTGFV 242

  Fly   196 TTTRITHATPAATYAHIYDRDWECDTEVPAESVGFH-VDIARQLVENAPGNRFNVILGGGMSPMG 259
            ||||:|||||||.|||:.||.|||::.:|||:.|.. :||||||:|...|...|||:|||...: 
  Fly   243 TTTRVTHATPAALYAHVPDRRWECESGMPAEAQGQGCMDIARQLIEQPTGQSINVIMGGGRQML- 306

  Fly   260 ILNASEVKTTIFEGPTETICTRG-DNRNLPAEWLAHHANDTVPPALVHNRKDLLNVNVKKVDHLM 323
               .|:| |.....|.:|...:. |.|:|..:|....|::.|..|:|.|.::|.|:|.:.||:::
  Fly   307 ---VSDV-TGSAADPLDTWAGQSKDGRDLIRDWRLKKADEGVSHAVVQNNRELWNLNGQDVDYVL 367

  Fly   324 GLFRNNHITYSIAR---EAGEPSLQEMTETALGILERGDESNGFVLLVEGGRIDQGHHMNYARAA 385
            |:|.|.|:.|...|   :||.|||..||..||.:|  |:...||:|:||.|.|||.||...||.|
  Fly   368 GIFANGHLMYDHERDRSDAGMPSLSNMTLKALEVL--GNSDKGFLLVVEAGLIDQAHHRGNARKA 430

  Fly   386 LHELYEFDLAIQAAVN---NTDP-DETLILVTADHSHAVTFNGYALRGADILGTA-NSHEKNDPM 445
            |.|:.|.:.|:::.::   ::|. ||||::|||||||::|.||:..||:.|||.| ||..:..| 
  Fly   431 LSEVLELNAAVESTLSFLKSSDRLDETLVIVTADHSHSLTINGHPDRGSSILGLAGNSKTEGTP- 494

  Fly   446 FYETISYANGPGYWDHLANDSRPQNSSNMWMPLKHFTAEERAAPTYRHLATVPRKDETHGGEDVA 510
             |.|::|  |..|.....:   ||..|.     |..||::..|..|...|.:...:..|||.||.
  Fly   495 -YTTLTY--GTSYQGFQVD---PQTQSR-----KDPTADDITAWEYTQQAAINTDENLHGGSDVT 548

  Fly   511 VFAYGPGSSLIRGVFEQNYLAYVMSYAGCLGPAKD 545
            :.|.|..|.|..||.||:|:|:.:|||..:|..:|
  Fly   549 IHADGAMSYLFHGVHEQSYVAHAISYALRIGRFRD 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp4NP_524601.2 PhoA 60..534 CDD:224699 201/489 (41%)
alkPPc 85..541 CDD:214515 198/470 (42%)
Alp12NP_001188848.1 ALP_like 134..579 CDD:304875 198/470 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466664
Domainoid 1 1.000 141 1.000 Domainoid score I216
eggNOG 1 0.900 - - E1_COG1785
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I224
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - otm51319
orthoMCL 1 0.900 - - OOG6_100381
Panther 1 1.100 - - P PTHR11596
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X159
1110.800

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